Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 MIR4265-201ENST00000582152 99 ntBASIC14.13□□□□□ -0.15
HDAC8Q9BY41 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 WT1-AS_6.1-201ENST00000614919 121 ntBASIC14.13□□□□□ -0.15
HDAC8Q9BY41 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 TCAM1P-207ENST00000485295 1537 ntBASIC14.13□□□□□ -0.15
HDAC8Q9BY41 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 AC015656.1-201ENST00000624209 3578 ntBASIC14.13□□□□□ -0.15
HDAC8Q9BY41 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDAC8Q9BY41 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 RN7SKP109-201ENST00000410592 316 ntBASIC14.12□□□□□ -0.15
HDAC8Q9BY41 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 DPY19L2P5-201ENST00000456300 331 ntBASIC14.12□□□□□ -0.15
HDAC8Q9BY41 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 AC007952.4-201ENST00000573866 637 ntBASIC14.12□□□□□ -0.15
HDAC8Q9BY41 AP005264.5-201ENST00000590066 467 ntBASIC14.12□□□□□ -0.15
HDAC8Q9BY41 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 U62317.3-201ENST00000608319 855 ntBASIC14.12□□□□□ -0.15
HDAC8Q9BY41 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 MIR6858-201ENST00000620733 67 ntBASIC14.12□□□□□ -0.15
HDAC8Q9BY41 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 AC005912.2-201ENST00000619492 2400 ntBASIC14.12□□□□□ -0.15
HDAC8Q9BY41 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.12□□□□□ -0.15
HDAC8Q9BY41 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDAC8Q9BY41 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDAC8Q9BY41 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.11□□□□□ -0.15
HDAC8Q9BY41 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDAC8Q9BY41 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDAC8Q9BY41 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDAC8Q9BY41 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HDAC8Q9BY41 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDAC8Q9BY41 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.11□□□□□ -0.15
HDAC8Q9BY41 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDAC8Q9BY41 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
HDAC8Q9BY41 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HDAC8Q9BY41 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDAC8Q9BY41 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDAC8Q9BY41 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HDAC8Q9BY41 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDAC8Q9BY41 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDAC8Q9BY41 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDAC8Q9BY41 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms