Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 AC091804.1-201ENST00000486888 567 ntBASIC15.25■□□□□ 0.03
LMO3Q8TAP4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 AL805961.1-203ENST00000641078 1258 ntBASIC15.25■□□□□ 0.03
LMO3Q8TAP4 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 AC025183.3-201ENST00000623526 1482 ntBASIC15.25■□□□□ 0.03
LMO3Q8TAP4 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 CICP17-201ENST00000418553 2377 ntBASIC15.25■□□□□ 0.03
LMO3Q8TAP4 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 AL359845.1-201ENST00000458202 1648 ntBASIC15.25■□□□□ 0.03
LMO3Q8TAP4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 AL139158.3-201ENST00000641212 1562 ntBASIC15.24■□□□□ 0.03
LMO3Q8TAP4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.24■□□□□ 0.03
LMO3Q8TAP4 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 AC138649.2-201ENST00000615886 705 ntBASIC15.24■□□□□ 0.03
LMO3Q8TAP4 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 AL161772.1-201ENST00000610494 4412 ntBASIC15.24■□□□□ 0.03
LMO3Q8TAP4 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 ABCD1P2-201ENST00000429313 1601 ntBASIC15.24■□□□□ 0.03
LMO3Q8TAP4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 AC005014.1-201ENST00000432006 2976 ntBASIC15.24■□□□□ 0.03
LMO3Q8TAP4 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC15.24■□□□□ 0.03
LMO3Q8TAP4 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 AC020658.7-201ENST00000624274 2442 ntBASIC15.23■□□□□ 0.03
LMO3Q8TAP4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms