Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS8Q8N3P4 PHB-210ENST00000511832 1509 ntTSL 2 BASIC21.97■■□□□ 1.11
VPS8Q8N3P4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS8Q8N3P4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS8Q8N3P4 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS8Q8N3P4 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS8Q8N3P4 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
VPS8Q8N3P4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
VPS8Q8N3P4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
VPS8Q8N3P4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS8Q8N3P4 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS8Q8N3P4 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS8Q8N3P4 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS8Q8N3P4 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS8Q8N3P4 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC21.97■■□□□ 1.11
VPS8Q8N3P4 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC21.97■■□□□ 1.11
VPS8Q8N3P4 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC21.97■■□□□ 1.11
VPS8Q8N3P4 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC21.97■■□□□ 1.11
VPS8Q8N3P4 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 AL009176.1-201ENST00000607876 650 ntBASIC21.96■■□□□ 1.11
VPS8Q8N3P4 AC002044.2-201ENST00000624910 970 ntBASIC21.96■■□□□ 1.11
VPS8Q8N3P4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
VPS8Q8N3P4 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
VPS8Q8N3P4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
VPS8Q8N3P4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
VPS8Q8N3P4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
VPS8Q8N3P4 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
VPS8Q8N3P4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 AL359091.4-201ENST00000610052 409 ntBASIC21.95■■□□□ 1.1
VPS8Q8N3P4 RETN-203ENST00000629642 400 ntTSL 5 BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VPS8Q8N3P4 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 AC007279.1-201ENST00000448547 837 ntBASIC21.94■■□□□ 1.1
VPS8Q8N3P4 AC018463.1-201ENST00000456674 917 ntBASIC21.94■■□□□ 1.1
VPS8Q8N3P4 RPS23-204ENST00000507980 836 ntTSL 2 BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms