Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 CMC2-204ENST00000562713 573 ntTSL 3 BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 CMC2-209ENST00000565108 399 ntTSL 2 BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC41PQ6P2S7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 MBP-201ENST00000354542 575 ntTSL 2 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 CALR4P-201ENST00000431943 946 ntBASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 RN7SL455P-201ENST00000580629 282 ntBASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 CR392039.2-201ENST00000623182 509 ntBASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC41PQ6P2S7 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 BX679664.3-201ENST00000414070 555 ntBASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 AC113935.1-201ENST00000471722 555 ntBASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 AL161670.2-201ENST00000557650 1227 ntBASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 MIR6787-201ENST00000616675 61 ntBASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 GPR182-203ENST00000622922 591 ntBASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC41PQ6P2S7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms