Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
RC3H1Q5TC82 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RC3H1Q5TC82 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 AC136604.1-202ENST00000425471 771 ntBASIC17.64■□□□□ 0.41
RC3H1Q5TC82 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 AL136084.1-201ENST00000449172 318 ntBASIC17.64■□□□□ 0.41
RC3H1Q5TC82 VDAC1P11-201ENST00000458323 852 ntBASIC17.64■□□□□ 0.41
RC3H1Q5TC82 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 AC091304.3-201ENST00000566500 716 ntBASIC17.64■□□□□ 0.41
RC3H1Q5TC82 RN7SL602P-201ENST00000578326 324 ntBASIC17.64■□□□□ 0.41
RC3H1Q5TC82 RN7SL718P-201ENST00000581254 303 ntBASIC17.64■□□□□ 0.41
RC3H1Q5TC82 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 AL591424.3-201ENST00000614278 872 ntBASIC17.64■□□□□ 0.41
RC3H1Q5TC82 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 CICP14-201ENST00000629111 2732 ntBASIC17.64■□□□□ 0.41
RC3H1Q5TC82 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RC3H1Q5TC82 Z98885.3-201ENST00000624882 1757 ntBASIC17.63■□□□□ 0.41
RC3H1Q5TC82 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 GH1-203ENST00000351388 685 ntTSL 2 BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 HDGF-202ENST00000368206 960 ntTSL 5 BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 OR7E155P-201ENST00000412208 1014 ntBASIC17.63■□□□□ 0.41
RC3H1Q5TC82 AC041040.1-201ENST00000425197 460 ntBASIC17.63■□□□□ 0.41
RC3H1Q5TC82 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 BMF-206ENST00000558774 671 ntTSL 3 BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 NEK4P3-201ENST00000604859 544 ntBASIC17.63■□□□□ 0.41
RC3H1Q5TC82 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
RC3H1Q5TC82 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.62■□□□□ 0.41
RC3H1Q5TC82 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RC3H1Q5TC82 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
RC3H1Q5TC82 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RC3H1Q5TC82 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RC3H1Q5TC82 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RC3H1Q5TC82 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RC3H1Q5TC82 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RC3H1Q5TC82 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RC3H1Q5TC82 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.62■□□□□ 0.41
RC3H1Q5TC82 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
RC3H1Q5TC82 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RC3H1Q5TC82 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RC3H1Q5TC82 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC17.62■□□□□ 0.41
RC3H1Q5TC82 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RC3H1Q5TC82 AC010086.2-201ENST00000428616 226 ntBASIC17.62■□□□□ 0.41
RC3H1Q5TC82 PGK1P2-201ENST00000431702 1214 ntBASIC17.62■□□□□ 0.41
RC3H1Q5TC82 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC17.62■□□□□ 0.41
RC3H1Q5TC82 AC015818.1-201ENST00000451011 244 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms