Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 BNIP3P7-201ENST00000605641 516 ntBASIC11.15□□□□□ -0.62
LINC01559Q495D7 CACNB2-214ENST00000612743 597 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01559Q495D7 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC01559Q495D7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.15□□□□□ -0.62
LINC01559Q495D7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
LINC01559Q495D7 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
LINC01559Q495D7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
LINC01559Q495D7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01559Q495D7 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01559Q495D7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01559Q495D7 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01559Q495D7 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01559Q495D7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01559Q495D7 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01559Q495D7 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
LINC01559Q495D7 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01559Q495D7 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.15□□□□□ -0.63
LINC01559Q495D7 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
LINC01559Q495D7 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
LINC01559Q495D7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
LINC01559Q495D7 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01559Q495D7 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
LINC01559Q495D7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01559Q495D7 AC089987.1-201ENST00000551654 2209 ntBASIC11.15□□□□□ -0.63
LINC01559Q495D7 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01559Q495D7 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01559Q495D7 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01559Q495D7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 ANKRD66-202ENST00000565422 1346 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 AC004461.1-201ENST00000412461 403 ntBASIC11.14□□□□□ -0.63
LINC01559Q495D7 MORF4L1P6-201ENST00000418771 268 ntBASIC11.14□□□□□ -0.63
LINC01559Q495D7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 ELOCP13-201ENST00000443934 329 ntBASIC11.14□□□□□ -0.63
LINC01559Q495D7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 AC137579.1-201ENST00000519978 836 ntTSL 3 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 RERG-205ENST00000537647 935 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 AC007342.1-201ENST00000565073 706 ntTSL 3 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 AL133499.1-201ENST00000596207 608 ntBASIC11.14□□□□□ -0.63
LINC01559Q495D7 GMCL1P2-201ENST00000605230 823 ntBASIC11.14□□□□□ -0.63
LINC01559Q495D7 AP001033.2-201ENST00000609701 1003 ntBASIC11.14□□□□□ -0.63
LINC01559Q495D7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 AC009093.7-201ENST00000623853 1223 ntBASIC11.14□□□□□ -0.63
LINC01559Q495D7 AC004461.2-201ENST00000629517 803 ntBASIC11.14□□□□□ -0.63
LINC01559Q495D7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms