RNA–Protein interactions for RNA: ENST00000370503.2

SPANXN3-201, Transcript of SPANX family member N3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPANXN3, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPANXN3-201ENST00000370503 AEBP2Q6ZN18 517 aaPredicted RBP28.25■■■□□ 2.11
SPANXN3-201ENST00000370503 CHIC1Q5VXU3 224 aa27.72■■■□□ 2.03
SPANXN3-201ENST00000370503 PHF23Q9BUL5 403 aaPredicted RBP24.36■■□□□ 1.49
SPANXN3-201ENST00000370503 SENP3Q9H4L4 574 aaPredicted RBP24■■□□□ 1.43
SPANXN3-201ENST00000370503 PLPPR3Q6T4P5 718 aa22.59■■□□□ 1.21
SPANXN3-201ENST00000370503 FOXD1Q16676 465 aa22.24■■□□□ 1.15
SPANXN3-201ENST00000370503 ADRA2BP18089 450 aa21.47■■□□□ 1.03
SPANXN3-201ENST00000370503 PPP6R1Q9UPN7 881 aa21.47■■□□□ 1.03
SPANXN3-201ENST00000370503 PIAS4Q8N2W9 510 aaPredicted RBP21.02■□□□□ 0.96
SPANXN3-201ENST00000370503 MSH5O43196 834 aa20.51■□□□□ 0.87
SPANXN3-201ENST00000370503 POTEDQ86YR6 584 aa20.02■□□□□ 0.8
SPANXN3-201ENST00000370503 PPP4R3CPQ6ZMV5 832 aa19.9■□□□□ 0.78
SPANXN3-201ENST00000370503 SCAF1Q9H7N4 1312 aaKnown RBP19.71■□□□□ 0.75
SPANXN3-201ENST00000370503 KCNA4P22459 653 aa19.53■□□□□ 0.72
SPANXN3-201ENST00000370503 MAPK8IP2Q13387 824 aaPredicted RBP19.45■□□□□ 0.7
SPANXN3-201ENST00000370503 NCBP3Q53F19 620 aaKnown RBP19.45■□□□□ 0.7
SPANXN3-201ENST00000370503 CNKSR2Q8WXI2 1034 aa19.33■□□□□ 0.68
SPANXN3-201ENST00000370503 DMRT2Q9Y5R5 561 aa19.16■□□□□ 0.66
SPANXN3-201ENST00000370503 NPM3O75607 178 aaKnown RBP19.12■□□□□ 0.65
SPANXN3-201ENST00000370503 RNF216Q9NWF9 866 aaPredicted RBP18.92■□□□□ 0.62
SPANXN3-201ENST00000370503 HOXD11P31277 338 aaPredicted RBP18.8■□□□□ 0.6
SPANXN3-201ENST00000370503 SLC4A1APQ9BWU0 796 aaKnown RBP18.65■□□□□ 0.58
SPANXN3-201ENST00000370503 DNAJC5BQ9UF47 199 aa18.53■□□□□ 0.56
SPANXN3-201ENST00000370503 DCAF8L1A6NGE4 600 aa18.38■□□□□ 0.53
SPANXN3-201ENST00000370503 EHMT2Q96KQ7 1210 aa18.24■□□□□ 0.51
SPANXN3-201ENST00000370503 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
SPANXN3-201ENST00000370503 FOXD4L1Q9NU39 408 aa17.97■□□□□ 0.47
SPANXN3-201ENST00000370503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.96■□□□□ 0.47
SPANXN3-201ENST00000370503 ZBTB22O15209 634 aa17.95■□□□□ 0.46
SPANXN3-201ENST00000370503 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
SPANXN3-201ENST00000370503 MYCNP04198 464 aaPredicted RBP17.68■□□□□ 0.42
SPANXN3-201ENST00000370503 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
SPANXN3-201ENST00000370503 RNF39Q9H2S5 420 aa17.55■□□□□ 0.4
SPANXN3-201ENST00000370503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.51■□□□□ 0.39
SPANXN3-201ENST00000370503 HNRNPUL2Q1KMD3 747 aaKnown RBP17.51■□□□□ 0.39
SPANXN3-201ENST00000370503 SAMD1Q6SPF0 538 aaPredicted RBP17.44■□□□□ 0.38
SPANXN3-201ENST00000370503 C1QBPQ07021 282 aaKnown RBP17.38■□□□□ 0.37
SPANXN3-201ENST00000370503 ATXN8OSP0DMR3 200 aa17.34■□□□□ 0.37
SPANXN3-201ENST00000370503 APLP2Q06481 763 aa17.31■□□□□ 0.36
SPANXN3-201ENST00000370503 ATF5Q9Y2D1 282 aaPredicted RBP17.16■□□□□ 0.34
SPANXN3-201ENST00000370503 SPINK5Q9NQ38 1064 aaPredicted RBP17.12■□□□□ 0.33
SPANXN3-201ENST00000370503 CAPN15O75808 1086 aa17.09■□□□□ 0.33
SPANXN3-201ENST00000370503 CACNB1Q02641 598 aaPredicted RBP17.07■□□□□ 0.32
SPANXN3-201ENST00000370503 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
SPANXN3-201ENST00000370503 ZNF219Q9P2Y4 722 aaPredicted RBP17.03■□□□□ 0.32
SPANXN3-201ENST00000370503 POLA2Q14181 598 aa16.77■□□□□ 0.28
SPANXN3-201ENST00000370503 ABCB7O75027 752 aa16.76■□□□□ 0.27
SPANXN3-201ENST00000370503 DSG3P32926 999 aa16.74■□□□□ 0.27
SPANXN3-201ENST00000370503 ZBTB12Q9Y330 459 aaPredicted RBP16.52■□□□□ 0.24
SPANXN3-201ENST00000370503 FBLN2P98095 1184 aa16.5■□□□□ 0.23
SPANXN3-201ENST00000370503 MKRN4PQ13434 485 aaPredicted RBP16.42■□□□□ 0.22
SPANXN3-201ENST00000370503 FKBP8Q14318 412 aa16.25■□□□□ 0.19
SPANXN3-201ENST00000370503 OSCARQ8IYS5 282 aa16.17■□□□□ 0.18
SPANXN3-201ENST00000370503 SPDYE4A6NLX3 237 aa16.14■□□□□ 0.17
SPANXN3-201ENST00000370503 SPDYE2BA6NHP3 402 aa16.06■□□□□ 0.16
SPANXN3-201ENST00000370503 SPDYE6P0CI01 402 aa16.06■□□□□ 0.16
SPANXN3-201ENST00000370503 SPDYE2Q495Y8 402 aa16.06■□□□□ 0.16
SPANXN3-201ENST00000370503 ZNF692Q9BU19 519 aaPredicted RBP16.03■□□□□ 0.16
SPANXN3-201ENST00000370503 RBM42Q9BTD8 480 aaKnown RBP15.99■□□□□ 0.15
SPANXN3-201ENST00000370503 SSUH2Q9Y2M2 353 aa15.92■□□□□ 0.14
SPANXN3-201ENST00000370503 PROM2Q8N271 834 aa15.85■□□□□ 0.13
SPANXN3-201ENST00000370503 PABPN1Q86U42 306 aaKnown RBP eCLIP15.8■□□□□ 0.12
SPANXN3-201ENST00000370503 AKT1S1Q96B36 256 aa15.8■□□□□ 0.12
SPANXN3-201ENST00000370503 FBXO3Q9UK99 471 aa15.68■□□□□ 0.1
SPANXN3-201ENST00000370503 REM2Q8IYK8 340 aaPredicted RBP15.64■□□□□ 0.09
SPANXN3-201ENST00000370503 STAG3Q9UJ98 1225 aa15.6■□□□□ 0.09
SPANXN3-201ENST00000370503 SPDYE1Q8NFV5 336 aaPredicted RBP15.57■□□□□ 0.08
SPANXN3-201ENST00000370503 CLEC11AQ9Y240 323 aa15.51■□□□□ 0.07
SPANXN3-201ENST00000370503 POTEHQ6S545 545 aa15.49■□□□□ 0.07
SPANXN3-201ENST00000370503 PITPNM1O00562 1244 aa15.45■□□□□ 0.06
SPANXN3-201ENST00000370503 VASPP50552 380 aaPredicted RBP15.42■□□□□ 0.06
SPANXN3-201ENST00000370503 PRR29P0C7W0 189 aa15.39■□□□□ 0.05
SPANXN3-201ENST00000370503 MIER1Q8N108 512 aa15.33■□□□□ 0.04
SPANXN3-201ENST00000370503 PLCD3Q8N3E9 789 aa15.32■□□□□ 0.04
SPANXN3-201ENST00000370503 PLEKHG5O94827 1062 aa15.27■□□□□ 0.04
SPANXN3-201ENST00000370503 CHRDL2Q6WN34 429 aa15.26■□□□□ 0.03
SPANXN3-201ENST00000370503 IFNLR1Q8IU57 520 aaPredicted RBP15.21■□□□□ 0.03
SPANXN3-201ENST00000370503 KLHL34Q8N239 644 aa15.19■□□□□ 0.02
SPANXN3-201ENST00000370503 CREBZFQ9NS37 354 aa15.17■□□□□ 0.02
SPANXN3-201ENST00000370503 ZBTB47Q9UFB7 747 aaPredicted RBP15.15■□□□□ 0.02
SPANXN3-201ENST00000370503 FXR2P51116 673 aaKnown RBP eCLIP15.14■□□□□ 0.01
SPANXN3-201ENST00000370503 CHADLQ6NUI6 762 aa15.1■□□□□ 0.01
SPANXN3-201ENST00000370503 PRKAR2AP13861 404 aaKnown RBP15.08■□□□□ 0
SPANXN3-201ENST00000370503 PIP4P2Q8N4L2 257 aa15.08■□□□□ 0
SPANXN3-201ENST00000370503 SPOCK2Q92563 424 aa15.05■□□□□ -0
SPANXN3-201ENST00000370503 MNX1P50219 401 aaPredicted RBP15.01□□□□□ -0.01
SPANXN3-201ENST00000370503 AMER1Q5JTC6 1135 aaPredicted RBP15□□□□□ -0.01
SPANXN3-201ENST00000370503 NPM1P06748 294 aaKnown RBP eCLIP14.98□□□□□ -0.01
SPANXN3-201ENST00000370503 FARP1Q9Y4F1 1045 aaPredicted RBP14.97□□□□□ -0.01
SPANXN3-201ENST00000370503 RTN4Q9NQC3 1192 aaKnown RBP14.92□□□□□ -0.02
SPANXN3-201ENST00000370503 NUBP1P53384 320 aa14.88□□□□□ -0.03
SPANXN3-201ENST00000370503 CIZ1Q9ULV3 898 aaPredicted RBP14.81□□□□□ -0.04
SPANXN3-201ENST00000370503 DCAF8Q5TAQ9 597 aa14.79□□□□□ -0.04
SPANXN3-201ENST00000370503 RASEFQ8IZ41 740 aa14.79□□□□□ -0.04
SPANXN3-201ENST00000370503 FAM212AQ96EL1 285 aa14.79□□□□□ -0.04
SPANXN3-201ENST00000370503 GSE1Q14687 1217 aa14.78□□□□□ -0.04
SPANXN3-201ENST00000370503 PKD2Q13563 968 aa14.73□□□□□ -0.05
SPANXN3-201ENST00000370503 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.05
SPANXN3-201ENST00000370503 PAK3O75914 559 aaPredicted RBP14.7□□□□□ -0.06
SPANXN3-201ENST00000370503 ECM2O94769 699 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms