Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
IRX4P78413 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
IRX4P78413 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
IRX4P78413 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 AC107918.4-201ENST00000641966 3141 ntBASIC15.07■□□□□ 0
IRX4P78413 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.07■□□□□ 0
IRX4P78413 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
IRX4P78413 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.07■□□□□ 0
IRX4P78413 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.07■□□□□ 0
IRX4P78413 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.07■□□□□ 0
IRX4P78413 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.07■□□□□ 0
IRX4P78413 AC005740.2-201ENST00000511085 419 ntBASIC15.07■□□□□ 0
IRX4P78413 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.07■□□□□ 0
IRX4P78413 AC022217.1-201ENST00000521069 738 ntBASIC15.07■□□□□ 0
IRX4P78413 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.07■□□□□ 0
IRX4P78413 PRKXP1-201ENST00000561423 1122 ntBASIC15.07■□□□□ 0
IRX4P78413 RN7SL713P-201ENST00000582127 302 ntBASIC15.07■□□□□ 0
IRX4P78413 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.07■□□□□ 0
IRX4P78413 OR10B1P-201ENST00000601666 907 ntBASIC15.07■□□□□ 0
IRX4P78413 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.07■□□□□ 0
IRX4P78413 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.07■□□□□ 0
IRX4P78413 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
IRX4P78413 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 AL360270.3-201ENST00000609118 1348 ntBASIC15.07■□□□□ 0
IRX4P78413 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
IRX4P78413 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC15.07■□□□□ 0
IRX4P78413 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.07■□□□□ 0
IRX4P78413 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.07■□□□□ 0
IRX4P78413 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.07■□□□□ 0
IRX4P78413 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC15.07■□□□□ 0
IRX4P78413 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
IRX4P78413 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.07■□□□□ 0
IRX4P78413 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.07■□□□□ 0
IRX4P78413 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.06■□□□□ 0
IRX4P78413 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
IRX4P78413 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.06■□□□□ 0
IRX4P78413 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.06■□□□□ 0
IRX4P78413 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
IRX4P78413 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC15.06■□□□□ 0
IRX4P78413 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
IRX4P78413 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.06■□□□□ 0
IRX4P78413 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.06■□□□□ 0
IRX4P78413 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.06■□□□□ 0
IRX4P78413 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.06■□□□□ 0
IRX4P78413 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.06■□□□□ 0
IRX4P78413 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.06■□□□□ 0
IRX4P78413 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
IRX4P78413 AC073413.1-201ENST00000603927 732 ntBASIC15.06■□□□□ 0
IRX4P78413 AP001002.3-201ENST00000623482 206 ntBASIC15.06■□□□□ 0
IRX4P78413 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.06■□□□□ 0
IRX4P78413 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 AC008132.1-202ENST00000342005 1389 ntBASIC15.06■□□□□ 0
IRX4P78413 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.06■□□□□ 0
IRX4P78413 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms