Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
CKS1BP61024 AC092139.4-201ENST00000624318 2794 ntBASIC10.19□□□□□ -0.78
CKS1BP61024 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
CKS1BP61024 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC10.19□□□□□ -0.78
CKS1BP61024 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CKS1BP61024 MAX-212ENST00000555932 1673 ntTSL 5 BASIC10.18□□□□□ -0.78
CKS1BP61024 GRAMD4P3-201ENST00000621665 1669 ntBASIC10.18□□□□□ -0.78
CKS1BP61024 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC10.18□□□□□ -0.78
CKS1BP61024 AC097359.2-201ENST00000604992 2389 ntBASIC10.18□□□□□ -0.78
CKS1BP61024 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CKS1BP61024 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
CKS1BP61024 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CKS1BP61024 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
CKS1BP61024 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC10.18□□□□□ -0.78
CKS1BP61024 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC10.18□□□□□ -0.78
CKS1BP61024 RCAN1-214ENST00000620920 2257 ntTSL 4 BASIC10.18□□□□□ -0.78
CKS1BP61024 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC10.18□□□□□ -0.78
CKS1BP61024 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CKS1BP61024 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CKS1BP61024 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC10.18□□□□□ -0.78
CKS1BP61024 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
CKS1BP61024 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
CKS1BP61024 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CKS1BP61024 LINC01588-203ENST00000529902 4279 ntTSL 2 BASIC10.18□□□□□ -0.78
CKS1BP61024 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CKS1BP61024 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CKS1BP61024 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
CKS1BP61024 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC10.18□□□□□ -0.78
CKS1BP61024 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CKS1BP61024 AP002761.4-201ENST00000565433 3361 ntBASIC10.18□□□□□ -0.78
CKS1BP61024 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
CKS1BP61024 ELL2P1-201ENST00000413990 1906 ntBASIC10.18□□□□□ -0.78
CKS1BP61024 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
CKS1BP61024 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
CKS1BP61024 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
CKS1BP61024 PMP22-202ENST00000395936 816 ntTSL 3 BASIC10.18□□□□□ -0.78
CKS1BP61024 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
CKS1BP61024 AC004832.2-201ENST00000426397 482 ntBASIC10.18□□□□□ -0.78
CKS1BP61024 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC10.18□□□□□ -0.78
CKS1BP61024 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CKS1BP61024 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC10.18□□□□□ -0.78
CKS1BP61024 GATD1-206ENST00000526325 756 ntTSL 5 BASIC10.18□□□□□ -0.78
CKS1BP61024 AL079307.3-201ENST00000556114 283 ntBASIC10.18□□□□□ -0.78
CKS1BP61024 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC10.18□□□□□ -0.78
CKS1BP61024 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
CKS1BP61024 INO80C-210ENST00000590757 595 ntTSL 2 BASIC10.18□□□□□ -0.78
CKS1BP61024 AC022145.2-201ENST00000598203 171 ntBASIC10.18□□□□□ -0.78
CKS1BP61024 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC10.18□□□□□ -0.78
CKS1BP61024 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC10.18□□□□□ -0.78
CKS1BP61024 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC10.18□□□□□ -0.78
CKS1BP61024 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CKS1BP61024 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC10.18□□□□□ -0.78
CKS1BP61024 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
CKS1BP61024 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CKS1BP61024 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
CKS1BP61024 ELMO1-201ENST00000310758 4022 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CKS1BP61024 SLC13A2-202ENST00000444914 2855 ntTSL 2 BASIC10.18□□□□□ -0.78
CKS1BP61024 IDO2-204ENST00000502986 2294 ntTSL 5 BASIC10.18□□□□□ -0.78
CKS1BP61024 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
CKS1BP61024 PITX2-202ENST00000354925 3359 ntAPPRIS ALT1 TSL 2 BASIC10.18□□□□□ -0.78
CKS1BP61024 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC10.18□□□□□ -0.78
CKS1BP61024 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
CKS1BP61024 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CKS1BP61024 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
CKS1BP61024 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
CKS1BP61024 DDO-201ENST00000368923 1953 ntTSL 2 BASIC10.17□□□□□ -0.78
CKS1BP61024 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 CAMK4-201ENST00000282356 12240 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
CKS1BP61024 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
CKS1BP61024 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC10.17□□□□□ -0.78
CKS1BP61024 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
CKS1BP61024 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
CKS1BP61024 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 LILRP1-201ENST00000444199 1370 ntBASIC10.17□□□□□ -0.78
CKS1BP61024 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC10.17□□□□□ -0.78
CKS1BP61024 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 ARHGAP36-203ENST00000370922 2736 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
CKS1BP61024 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 CD81-202ENST00000381036 880 ntTSL 3 BASIC10.17□□□□□ -0.78
CKS1BP61024 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
CKS1BP61024 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC10.17□□□□□ -0.78
CKS1BP61024 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms