Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AC105129.2-201ENST00000559536 390 ntBASIC15.18■□□□□ 0.02
TUBP50607 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.18■□□□□ 0.02
TUBP50607 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.18■□□□□ 0.02
TUBP50607 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.18■□□□□ 0.02
TUBP50607 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.18■□□□□ 0.02
TUBP50607 AL353770.1-201ENST00000614915 403 ntBASIC15.18■□□□□ 0.02
TUBP50607 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TUBP50607 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBP50607 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TUBP50607 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.18■□□□□ 0.02
TUBP50607 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TUBP50607 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TUBP50607 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.18■□□□□ 0.02
TUBP50607 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC15.18■□□□□ 0.02
TUBP50607 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBP50607 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.18■□□□□ 0.02
TUBP50607 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBP50607 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBP50607 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBP50607 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TUBP50607 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBP50607 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBP50607 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TUBP50607 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TUBP50607 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBP50607 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBP50607 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBP50607 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBP50607 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBP50607 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBP50607 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TUBP50607 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBP50607 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBP50607 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
TUBP50607 KRT8P19-201ENST00000551916 1455 ntBASIC15.17■□□□□ 0.02
TUBP50607 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TUBP50607 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBP50607 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.17■□□□□ 0.02
TUBP50607 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.17■□□□□ 0.02
TUBP50607 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBP50607 OR2R1P-201ENST00000441404 914 ntBASIC15.17■□□□□ 0.02
TUBP50607 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBP50607 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.17■□□□□ 0.02
TUBP50607 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.17■□□□□ 0.02
TUBP50607 PGAM1P5-201ENST00000548011 764 ntBASIC15.17■□□□□ 0.02
TUBP50607 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBP50607 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBP50607 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.17■□□□□ 0.02
TUBP50607 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBP50607 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBP50607 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TUBP50607 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
TUBP50607 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TUBP50607 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBP50607 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TUBP50607 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TUBP50607 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBP50607 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TUBP50607 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
TUBP50607 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBP50607 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBP50607 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.16■□□□□ 0.02
TUBP50607 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.16■□□□□ 0.02
TUBP50607 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.16■□□□□ 0.02
TUBP50607 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.16■□□□□ 0.02
TUBP50607 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms