Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CDKN2CP42773 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.61□□□□□ -0.23
CDKN2CP42773 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDKN2CP42773 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDKN2CP42773 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.61□□□□□ -0.23
CDKN2CP42773 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CDKN2CP42773 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDKN2CP42773 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDKN2CP42773 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDKN2CP42773 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDKN2CP42773 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDKN2CP42773 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.61□□□□□ -0.23
CDKN2CP42773 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDKN2CP42773 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.61□□□□□ -0.23
CDKN2CP42773 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDKN2CP42773 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDKN2CP42773 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.6□□□□□ -0.23
CDKN2CP42773 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CDKN2CP42773 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CDKN2CP42773 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.6□□□□□ -0.23
CDKN2CP42773 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 REXO1L6P-201ENST00000603433 1515 ntBASIC13.6□□□□□ -0.23
CDKN2CP42773 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CDKN2CP42773 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.6□□□□□ -0.23
CDKN2CP42773 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CDKN2CP42773 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
CDKN2CP42773 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 MARK2P9-201ENST00000430958 1727 ntBASIC13.6□□□□□ -0.23
CDKN2CP42773 HIST2H2BB-201ENST00000449108 381 ntBASIC13.6□□□□□ -0.23
CDKN2CP42773 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.6□□□□□ -0.23
CDKN2CP42773 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CDKN2CP42773 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.6□□□□□ -0.23
CDKN2CP42773 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CDKN2CP42773 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.6□□□□□ -0.23
CDKN2CP42773 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
CDKN2CP42773 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.6□□□□□ -0.23
CDKN2CP42773 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.6□□□□□ -0.23
CDKN2CP42773 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.6□□□□□ -0.23
CDKN2CP42773 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
CDKN2CP42773 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.6□□□□□ -0.23
CDKN2CP42773 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.6□□□□□ -0.23
CDKN2CP42773 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.6□□□□□ -0.23
CDKN2CP42773 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
CDKN2CP42773 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDKN2CP42773 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDKN2CP42773 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.59□□□□□ -0.23
CDKN2CP42773 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDKN2CP42773 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.59□□□□□ -0.23
CDKN2CP42773 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.59□□□□□ -0.23
CDKN2CP42773 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDKN2CP42773 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDKN2CP42773 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDKN2CP42773 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDKN2CP42773 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CDKN2CP42773 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDKN2CP42773 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDKN2CP42773 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDKN2CP42773 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDKN2CP42773 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDKN2CP42773 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CDKN2CP42773 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDKN2CP42773 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
CDKN2CP42773 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CDKN2CP42773 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDKN2CP42773 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.59□□□□□ -0.23
CDKN2CP42773 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.59□□□□□ -0.23
CDKN2CP42773 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.59□□□□□ -0.23
CDKN2CP42773 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CDKN2CP42773 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms