Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC17.46■□□□□ 0.39
PDE6BP35913 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC17.46■□□□□ 0.39
PDE6BP35913 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6BP35913 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.46■□□□□ 0.39
PDE6BP35913 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC17.46■□□□□ 0.39
PDE6BP35913 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PDE6BP35913 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6BP35913 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6BP35913 AGAP7P-201ENST00000582299 2062 ntBASIC17.46■□□□□ 0.39
PDE6BP35913 AGAP14-201ENST00000624701 2060 ntBASIC17.46■□□□□ 0.39
PDE6BP35913 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PDE6BP35913 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PDE6BP35913 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
PDE6BP35913 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
PDE6BP35913 AC007950.2-201ENST00000615045 2347 ntBASIC17.46■□□□□ 0.38
PDE6BP35913 GOLGA8UP-201ENST00000527159 1755 ntBASIC17.45■□□□□ 0.38
PDE6BP35913 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.45■□□□□ 0.38
PDE6BP35913 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.45■□□□□ 0.38
PDE6BP35913 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC17.45■□□□□ 0.38
PDE6BP35913 AP002414.2-201ENST00000591780 3365 ntBASIC17.45■□□□□ 0.38
PDE6BP35913 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PDE6BP35913 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.45■□□□□ 0.38
PDE6BP35913 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.45■□□□□ 0.38
PDE6BP35913 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PDE6BP35913 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC17.45■□□□□ 0.38
PDE6BP35913 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC17.45■□□□□ 0.38
PDE6BP35913 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC17.45■□□□□ 0.38
PDE6BP35913 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC17.45■□□□□ 0.38
PDE6BP35913 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC17.45■□□□□ 0.38
PDE6BP35913 SEPHS2P1-201ENST00000511618 1162 ntBASIC17.45■□□□□ 0.38
PDE6BP35913 AC092612.1-201ENST00000514501 998 ntBASIC17.45■□□□□ 0.38
PDE6BP35913 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PDE6BP35913 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC17.45■□□□□ 0.38
PDE6BP35913 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PDE6BP35913 ESR1-214ENST00000638569 132 ntTSL 5 BASIC17.45■□□□□ 0.38
PDE6BP35913 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.45■□□□□ 0.38
PDE6BP35913 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PDE6BP35913 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PDE6BP35913 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PDE6BP35913 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.45■□□□□ 0.38
PDE6BP35913 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC17.45■□□□□ 0.38
PDE6BP35913 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 AC018529.2-202ENST00000611482 3087 ntBASIC17.45■□□□□ 0.38
PDE6BP35913 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC17.45■□□□□ 0.38
PDE6BP35913 PPT1-215ENST00000641471 2368 ntBASIC17.45■□□□□ 0.38
PDE6BP35913 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PDE6BP35913 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6BP35913 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PDE6BP35913 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PDE6BP35913 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PDE6BP35913 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.44■□□□□ 0.38
PDE6BP35913 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.44■□□□□ 0.38
PDE6BP35913 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.44■□□□□ 0.38
PDE6BP35913 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC17.44■□□□□ 0.38
PDE6BP35913 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PDE6BP35913 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC17.44■□□□□ 0.38
PDE6BP35913 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 GOLGA6L16P-201ENST00000441780 1299 ntBASIC17.44■□□□□ 0.38
PDE6BP35913 AC092896.1-201ENST00000465850 380 ntBASIC17.44■□□□□ 0.38
PDE6BP35913 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC17.44■□□□□ 0.38
PDE6BP35913 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC17.44■□□□□ 0.38
PDE6BP35913 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC17.44■□□□□ 0.38
PDE6BP35913 AL590235.1-201ENST00000564650 861 ntBASIC17.44■□□□□ 0.38
PDE6BP35913 URAHP-205ENST00000610227 398 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms