Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.36□□□□□ -0.43
CD40P25942 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
CD40P25942 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CD40P25942 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.36□□□□□ -0.43
CD40P25942 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CD40P25942 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.36□□□□□ -0.43
CD40P25942 OR8T1P-201ENST00000421347 918 ntBASIC12.36□□□□□ -0.43
CD40P25942 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.36□□□□□ -0.43
CD40P25942 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.36□□□□□ -0.43
CD40P25942 FTH1P22-201ENST00000456305 520 ntBASIC12.36□□□□□ -0.43
CD40P25942 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.36□□□□□ -0.43
CD40P25942 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
CD40P25942 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC12.36□□□□□ -0.43
CD40P25942 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.36□□□□□ -0.43
CD40P25942 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CD40P25942 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.36□□□□□ -0.43
CD40P25942 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.36□□□□□ -0.43
CD40P25942 AC009560.1-201ENST00000620208 434 ntBASIC12.36□□□□□ -0.43
CD40P25942 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.36□□□□□ -0.43
CD40P25942 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.36□□□□□ -0.43
CD40P25942 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
CD40P25942 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CD40P25942 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.36□□□□□ -0.43
CD40P25942 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
CD40P25942 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CD40P25942 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CD40P25942 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD40P25942 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.36□□□□□ -0.43
CD40P25942 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CD40P25942 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD40P25942 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD40P25942 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD40P25942 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.35□□□□□ -0.43
CD40P25942 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CD40P25942 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CD40P25942 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD40P25942 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CD40P25942 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CD40P25942 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD40P25942 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CD40P25942 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD40P25942 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.35□□□□□ -0.43
CD40P25942 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC12.35□□□□□ -0.43
CD40P25942 AP000356.3-201ENST00000382243 753 ntBASIC12.35□□□□□ -0.43
CD40P25942 MIR33B-201ENST00000385104 96 ntBASIC12.35□□□□□ -0.43
CD40P25942 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CD40P25942 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD40P25942 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
CD40P25942 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.35□□□□□ -0.43
CD40P25942 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC12.35□□□□□ -0.43
CD40P25942 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC12.35□□□□□ -0.43
CD40P25942 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.35□□□□□ -0.43
CD40P25942 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.35□□□□□ -0.43
CD40P25942 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.35□□□□□ -0.43
CD40P25942 AL512310.5-201ENST00000551999 515 ntBASIC12.35□□□□□ -0.43
CD40P25942 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.35□□□□□ -0.43
CD40P25942 MIR4706-201ENST00000582134 82 ntBASIC12.35□□□□□ -0.43
CD40P25942 AC005632.3-201ENST00000605544 308 ntBASIC12.35□□□□□ -0.43
CD40P25942 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.35□□□□□ -0.43
CD40P25942 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.35□□□□□ -0.43
CD40P25942 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.35□□□□□ -0.43
CD40P25942 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD40P25942 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CD40P25942 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD40P25942 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD40P25942 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.35□□□□□ -0.43
CD40P25942 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CD40P25942 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.35□□□□□ -0.43
CD40P25942 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CD40P25942 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD40P25942 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.35□□□□□ -0.43
CD40P25942 LINC01815-202ENST00000641468 1409 ntBASIC12.35□□□□□ -0.43
CD40P25942 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
CD40P25942 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD40P25942 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD40P25942 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CD40P25942 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD40P25942 AC074138.1-201ENST00000611182 1303 ntBASIC12.35□□□□□ -0.43
CD40P25942 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms