Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC3P19447 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC3P19447 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC3P19447 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC3P19447 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC3P19447 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ERCC3P19447 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC3P19447 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ERCC3P19447 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ERCC3P19447 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ERCC3P19447 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.66■□□□□ 0.26
ERCC3P19447 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.66■□□□□ 0.26
ERCC3P19447 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.66■□□□□ 0.26
ERCC3P19447 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ERCC3P19447 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ERCC3P19447 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ERCC3P19447 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC3P19447 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC3P19447 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.66■□□□□ 0.26
ERCC3P19447 AC114501.1-201ENST00000445949 172 ntBASIC16.66■□□□□ 0.26
ERCC3P19447 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ERCC3P19447 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC3P19447 FTH1P22-201ENST00000456305 520 ntBASIC16.66■□□□□ 0.26
ERCC3P19447 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.66■□□□□ 0.26
ERCC3P19447 RN7SL818P-201ENST00000485099 259 ntBASIC16.66■□□□□ 0.26
ERCC3P19447 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.66■□□□□ 0.26
ERCC3P19447 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.66■□□□□ 0.26
ERCC3P19447 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC3P19447 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.66■□□□□ 0.26
ERCC3P19447 AC124068.2-201ENST00000569473 1109 ntBASIC16.66■□□□□ 0.26
ERCC3P19447 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ERCC3P19447 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.66■□□□□ 0.26
ERCC3P19447 RN7SL725P-201ENST00000606439 259 ntBASIC16.66■□□□□ 0.26
ERCC3P19447 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.66■□□□□ 0.26
ERCC3P19447 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.66■□□□□ 0.26
ERCC3P19447 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ERCC3P19447 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ERCC3P19447 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ERCC3P19447 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 AL359183.1-201ENST00000623796 2132 ntBASIC16.66■□□□□ 0.26
ERCC3P19447 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC3P19447 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ERCC3P19447 AC007191.1-201ENST00000623179 2995 ntBASIC16.65■□□□□ 0.26
ERCC3P19447 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.65■□□□□ 0.26
ERCC3P19447 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
ERCC3P19447 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.65■□□□□ 0.26
ERCC3P19447 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.65■□□□□ 0.26
ERCC3P19447 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.65■□□□□ 0.26
ERCC3P19447 AC087392.5-201ENST00000612517 489 ntBASIC16.65■□□□□ 0.26
ERCC3P19447 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ERCC3P19447 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
ERCC3P19447 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms