Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.65■□□□□ 0.26
CAPN2P17655 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN2P17655 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN2P17655 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN2P17655 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN2P17655 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN2P17655 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN2P17655 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN2P17655 TCAF1P1-201ENST00000414990 2232 ntBASIC16.65■□□□□ 0.26
CAPN2P17655 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN2P17655 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CAPN2P17655 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN2P17655 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN2P17655 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CAPN2P17655 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CAPN2P17655 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CAPN2P17655 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CAPN2P17655 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
CAPN2P17655 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CAPN2P17655 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
CAPN2P17655 AC005562.1-201ENST00000583030 3219 ntBASIC16.64■□□□□ 0.26
CAPN2P17655 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.64■□□□□ 0.25
CAPN2P17655 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CAPN2P17655 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 KRT8P31-201ENST00000504812 1408 ntBASIC16.64■□□□□ 0.25
CAPN2P17655 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 SLC9A3P3-201ENST00000457608 2229 ntBASIC16.64■□□□□ 0.25
CAPN2P17655 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CAPN2P17655 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 AL583805.1-201ENST00000391389 531 ntBASIC16.64■□□□□ 0.25
CAPN2P17655 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.64■□□□□ 0.25
CAPN2P17655 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.64■□□□□ 0.25
CAPN2P17655 AL354861.1-201ENST00000445213 355 ntBASIC16.64■□□□□ 0.25
CAPN2P17655 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.64■□□□□ 0.25
CAPN2P17655 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CAPN2P17655 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CAPN2P17655 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CAPN2P17655 DNM1P51-201ENST00000558149 522 ntBASIC16.64■□□□□ 0.25
CAPN2P17655 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CAPN2P17655 RN7SL470P-201ENST00000583069 259 ntBASIC16.64■□□□□ 0.25
CAPN2P17655 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.64■□□□□ 0.25
CAPN2P17655 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CAPN2P17655 AC004466.1-201ENST00000599515 1080 ntBASIC16.64■□□□□ 0.25
CAPN2P17655 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 MIR6720-201ENST00000611664 98 ntBASIC16.64■□□□□ 0.25
CAPN2P17655 AL157813.1-201ENST00000612996 587 ntBASIC16.64■□□□□ 0.25
CAPN2P17655 AC073592.2-201ENST00000623062 780 ntBASIC16.64■□□□□ 0.25
CAPN2P17655 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.64■□□□□ 0.25
CAPN2P17655 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.64■□□□□ 0.25
CAPN2P17655 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CAPN2P17655 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN2P17655 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CAPN2P17655 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN2P17655 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.63■□□□□ 0.25
CAPN2P17655 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CAPN2P17655 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN2P17655 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN2P17655 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN2P17655 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CAPN2P17655 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CAPN2P17655 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN2P17655 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN2P17655 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CAPN2P17655 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.63■□□□□ 0.25
CAPN2P17655 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN2P17655 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.63■□□□□ 0.25
CAPN2P17655 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.63■□□□□ 0.25
CAPN2P17655 RPSAP15-201ENST00000448168 861 ntBASIC16.63■□□□□ 0.25
CAPN2P17655 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN2P17655 AGPAT5P1-201ENST00000455855 1019 ntBASIC16.63■□□□□ 0.25
CAPN2P17655 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.63■□□□□ 0.25
CAPN2P17655 AC026434.2-201ENST00000506094 1078 ntBASIC16.63■□□□□ 0.25
CAPN2P17655 TMCO5B-205ENST00000530020 894 ntBASIC16.63■□□□□ 0.25
CAPN2P17655 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN2P17655 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.63■□□□□ 0.25
CAPN2P17655 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.63■□□□□ 0.25
CAPN2P17655 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN2P17655 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CAPN2P17655 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms