Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 HNRNPA1P63-201ENST00000427917 963 ntBASIC10.83□□□□□ -0.68
KNCNA6PVL3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC10.83□□□□□ -0.68
KNCNA6PVL3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
KNCNA6PVL3 GOLGA2P4-201ENST00000441462 777 ntBASIC10.83□□□□□ -0.68
KNCNA6PVL3 HSPB1P2-201ENST00000448722 546 ntBASIC10.83□□□□□ -0.68
KNCNA6PVL3 RNMTL1P1-201ENST00000454103 560 ntBASIC10.83□□□□□ -0.68
KNCNA6PVL3 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC10.83□□□□□ -0.68
KNCNA6PVL3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC10.83□□□□□ -0.68
KNCNA6PVL3 HNRNPA1P36-201ENST00000521313 955 ntBASIC10.83□□□□□ -0.68
KNCNA6PVL3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC10.83□□□□□ -0.68
KNCNA6PVL3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 RBM8B-201ENST00000555532 525 ntBASIC10.83□□□□□ -0.68
KNCNA6PVL3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
KNCNA6PVL3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
KNCNA6PVL3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC10.83□□□□□ -0.68
KNCNA6PVL3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC10.83□□□□□ -0.68
KNCNA6PVL3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC10.83□□□□□ -0.68
KNCNA6PVL3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
KNCNA6PVL3 AL162426.1-201ENST00000624141 743 ntBASIC10.83□□□□□ -0.68
KNCNA6PVL3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC10.83□□□□□ -0.68
KNCNA6PVL3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
KNCNA6PVL3 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC10.83□□□□□ -0.68
KNCNA6PVL3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 STRCP1-201ENST00000509801 5328 ntBASIC10.83□□□□□ -0.68
KNCNA6PVL3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
KNCNA6PVL3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC10.83□□□□□ -0.68
KNCNA6PVL3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC10.83□□□□□ -0.68
KNCNA6PVL3 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KNCNA6PVL3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
KNCNA6PVL3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC10.83□□□□□ -0.68
KNCNA6PVL3 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 AL645933.1-201ENST00000440087 609 ntBASIC10.82□□□□□ -0.68
KNCNA6PVL3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 AC005586.2-201ENST00000563946 837 ntBASIC10.82□□□□□ -0.68
KNCNA6PVL3 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 AC104982.3-201ENST00000581995 514 ntBASIC10.82□□□□□ -0.68
KNCNA6PVL3 AC008805.1-201ENST00000590892 364 ntBASIC10.82□□□□□ -0.68
KNCNA6PVL3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 AC009884.2-201ENST00000603110 324 ntBASIC10.82□□□□□ -0.68
KNCNA6PVL3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 ABBA01031663.1-201ENST00000635630 790 ntBASIC10.82□□□□□ -0.68
KNCNA6PVL3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 REXO1L6P-201ENST00000603433 1515 ntBASIC10.82□□□□□ -0.68
KNCNA6PVL3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
KNCNA6PVL3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KNCNA6PVL3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms