Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 AC009093.10-201ENST00000641956 1442 ntBASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 AC090505.1-201ENST00000430515 1834 ntBASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 FUK-202ENST00000378912 3925 ntTSL 2 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 RET-205ENST00000615310 4337 ntTSL 5 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 RBM38-204ENST00000371219 760 ntTSL 2 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 MIR1909-201ENST00000411312 80 ntBASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 AC026954.1-201ENST00000429771 1293 ntBASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 CHMP1AP1-201ENST00000445563 662 ntBASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 AL136301.1-201ENST00000615830 422 ntBASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 WNT11-204ENST00000621122 789 ntTSL 5 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HLA-DRB4X5D2U9 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 KRT8P28-201ENST00000433288 1390 ntBASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 SHC1P1-201ENST00000425230 1745 ntBASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms