Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 PRKXP1-201ENST00000561423 1122 ntBASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 MIR3147-201ENST00000577811 66 ntBASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 AC018635.2-201ENST00000608625 364 ntBASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 AL157813.1-201ENST00000612996 587 ntBASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 TUBB8P4-201ENST00000511806 1324 ntBASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 AC006480.2-201ENST00000609770 1337 ntBASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAI2Q9Y5P3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 RN7SKP214-201ENST00000364208 315 ntBASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 IQSEC3P1-201ENST00000538799 536 ntBASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 AC140658.4-201ENST00000561990 352 ntBASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 AL645939.5-201ENST00000606834 243 ntBASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 AL805961.1-203ENST00000641078 1258 ntBASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 AP002353.1-201ENST00000528257 1599 ntBASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAI2Q9Y5P3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 AC092580.1-201ENST00000433998 658 ntBASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 Z97180.1-201ENST00000445173 988 ntBASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 RN7SL555P-201ENST00000584742 339 ntBASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 TCAM1P-207ENST00000485295 1537 ntBASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.54□□□□□ -0.08
RAI2Q9Y5P3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms