Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 FTH1P22-201ENST00000456305 520 ntBASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 AC022447.6-201ENST00000515522 438 ntBASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 AC087045.2-201ENST00000606279 1003 ntBASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 AC007881.3-201ENST00000608897 607 ntBASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 RN7SL736P-201ENST00000613111 269 ntBASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 RPL17P11-201ENST00000417593 544 ntBASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 RN7SL555P-201ENST00000584742 339 ntBASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 AC018635.2-201ENST00000608625 364 ntBASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 TEKT4P2-202ENST00000559466 1312 ntBASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 AGGF1P1-201ENST00000509500 2073 ntBASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTDP1Q9Y5B0 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 AC215219.1-201ENST00000400706 1817 ntBASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms