Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 AC135782.3-201ENST00000562782 2105 ntBASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 AC114501.2-201ENST00000439631 535 ntBASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 LRRC59-203ENST00000576448 1531 ntBASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.11□□□□□ -0.47
KCNIP3Q9Y2W7 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 PCDHB18P-202ENST00000526308 3197 ntBASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 BEND3P3-201ENST00000611030 2440 ntBASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 BTBD7P1-201ENST00000447253 1453 ntBASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms