Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC19.16■□□□□ 0.66
PHF8Q9UPP1 AC113385.2-201ENST00000614465 762 ntBASIC19.16■□□□□ 0.66
PHF8Q9UPP1 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PHF8Q9UPP1 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC19.16■□□□□ 0.66
PHF8Q9UPP1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHF8Q9UPP1 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHF8Q9UPP1 USP35-204ENST00000530267 2419 ntTSL 2 BASIC19.16■□□□□ 0.66
PHF8Q9UPP1 AL590824.1-201ENST00000403828 1349 ntBASIC19.16■□□□□ 0.66
PHF8Q9UPP1 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC19.16■□□□□ 0.66
PHF8Q9UPP1 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PHF8Q9UPP1 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHF8Q9UPP1 AC105917.1-201ENST00000506637 2539 ntBASIC19.16■□□□□ 0.66
PHF8Q9UPP1 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC19.16■□□□□ 0.66
PHF8Q9UPP1 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHF8Q9UPP1 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHF8Q9UPP1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHF8Q9UPP1 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC19.16■□□□□ 0.66
PHF8Q9UPP1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 AC068760.1-201ENST00000493579 1953 ntBASIC19.15■□□□□ 0.66
PHF8Q9UPP1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 AL139158.3-201ENST00000641212 1562 ntBASIC19.15■□□□□ 0.66
PHF8Q9UPP1 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 AC132872.4-202ENST00000622924 2756 ntBASIC19.15■□□□□ 0.66
PHF8Q9UPP1 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 MIR1307-201ENST00000408840 149 ntBASIC19.15■□□□□ 0.66
PHF8Q9UPP1 AC004522.1-201ENST00000419978 654 ntBASIC19.15■□□□□ 0.66
PHF8Q9UPP1 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 GULOP-201ENST00000454030 748 ntBASIC19.15■□□□□ 0.66
PHF8Q9UPP1 TBC1D3P6-201ENST00000505954 962 ntBASIC19.15■□□□□ 0.66
PHF8Q9UPP1 BCL2L12P1-201ENST00000508390 733 ntBASIC19.15■□□□□ 0.66
PHF8Q9UPP1 MIR2278-201ENST00000516344 96 ntBASIC19.15■□□□□ 0.66
PHF8Q9UPP1 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 RN7SL605P-201ENST00000577229 281 ntBASIC19.15■□□□□ 0.66
PHF8Q9UPP1 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHF8Q9UPP1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
PHF8Q9UPP1 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PHF8Q9UPP1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 CTSL-202ENST00000342020 933 ntTSL 2 BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 RPL10-203ENST00000406022 748 ntTSL 3 BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 AC136604.1-202ENST00000425471 771 ntBASIC19.14■□□□□ 0.65
PHF8Q9UPP1 ZNF877P-201ENST00000437614 612 ntBASIC19.14■□□□□ 0.65
PHF8Q9UPP1 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 AC120498.7-201ENST00000562876 330 ntBASIC19.14■□□□□ 0.65
PHF8Q9UPP1 AC091304.3-201ENST00000566500 716 ntBASIC19.14■□□□□ 0.65
PHF8Q9UPP1 MED11-202ENST00000573708 802 ntTSL 2 BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 MIR4746-201ENST00000579802 71 ntBASIC19.14■□□□□ 0.65
PHF8Q9UPP1 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 MIR8071-1-201ENST00000616769 65 ntBASIC19.14■□□□□ 0.65
PHF8Q9UPP1 MIR8071-2-201ENST00000616772 65 ntBASIC19.14■□□□□ 0.65
PHF8Q9UPP1 AC010531.8-201ENST00000623341 685 ntBASIC19.14■□□□□ 0.65
PHF8Q9UPP1 AC020931.1-201ENST00000589622 1346 ntBASIC19.14■□□□□ 0.65
PHF8Q9UPP1 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 PES1P2-201ENST00000449745 1735 ntBASIC19.14■□□□□ 0.65
PHF8Q9UPP1 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHF8Q9UPP1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PHF8Q9UPP1 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms