Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATP2A3Q93084 AC136759.1-202ENST00000530858 2194 ntBASIC15.22■□□□□ 0.03
ATP2A3Q93084 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATP2A3Q93084 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATP2A3Q93084 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATP2A3Q93084 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATP2A3Q93084 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATP2A3Q93084 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATP2A3Q93084 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATP2A3Q93084 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATP2A3Q93084 AC078875.1-201ENST00000431907 724 ntBASIC15.22■□□□□ 0.03
ATP2A3Q93084 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 AC128714.1-201ENST00000637035 887 ntBASIC15.22■□□□□ 0.03
ATP2A3Q93084 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATP2A3Q93084 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATP2A3Q93084 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATP2A3Q93084 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATP2A3Q93084 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATP2A3Q93084 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATP2A3Q93084 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATP2A3Q93084 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATP2A3Q93084 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.22■□□□□ 0.03
ATP2A3Q93084 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 BEND3P1-201ENST00000421591 1944 ntBASIC15.21■□□□□ 0.03
ATP2A3Q93084 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 FTLP1-201ENST00000449155 526 ntBASIC15.21■□□□□ 0.03
ATP2A3Q93084 EEF1DP6-201ENST00000449232 372 ntBASIC15.21■□□□□ 0.03
ATP2A3Q93084 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 AC020922.3-201ENST00000595064 547 ntBASIC15.21■□□□□ 0.03
ATP2A3Q93084 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ATP2A3Q93084 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP2A3Q93084 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ATP2A3Q93084 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.21■□□□□ 0.02
ATP2A3Q93084 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
ATP2A3Q93084 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
ATP2A3Q93084 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
ATP2A3Q93084 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
ATP2A3Q93084 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.21■□□□□ 0.02
ATP2A3Q93084 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP2A3Q93084 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP2A3Q93084 PTENP1-202ENST00000532280 3996 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms