Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 PCDHB17P-202ENST00000623466 3066 ntBASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
SMIM11BQ8TCY0 MSNP1-201ENST00000511640 1732 ntBASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 PHB-210ENST00000511832 1509 ntTSL 2 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 TUBB3P1-201ENST00000405796 1332 ntBASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 AC064801.2-201ENST00000625052 1303 ntBASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 LINC01165-201ENST00000445190 1623 ntBASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 HNRNPA1P28-201ENST00000424481 961 ntBASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 AC026434.2-201ENST00000506094 1078 ntBASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 AL589739.1-201ENST00000607720 493 ntBASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 AC012313.10-201ENST00000623509 926 ntBASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 AC104109.2-201ENST00000602919 1418 ntBASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 PAM-203ENST00000346918 3302 ntTSL 5 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 AL138799.1-201ENST00000448213 1675 ntBASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
SMIM11BQ8TCY0 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms