Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 BX088702.1-201ENST00000610784 235 ntBASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 MIR6720-201ENST00000611664 98 ntBASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 AC027601.3-201ENST00000622907 509 ntBASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 AC105206.1-202ENST00000314927 2368 ntBASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 AL157791.1-201ENST00000553667 1699 ntBASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 VDAC1P1-201ENST00000439229 848 ntBASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 HLA-J-204ENST00000495278 958 ntBASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 RCC2P8-201ENST00000502779 1035 ntBASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 AL160314.3-201ENST00000556041 767 ntBASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 FGFR3P5-201ENST00000564496 886 ntBASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 SNORD3B-2-202ENST00000571722 791 ntBASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 AL132994.2-201ENST00000603120 687 ntBASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 AC015967.2-201ENST00000624092 234 ntBASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 AC006435.4-201ENST00000625037 234 ntBASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 AL356737.1-201ENST00000634391 234 ntBASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 Z98259.2-201ENST00000641583 609 ntBASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 AC018529.2-202ENST00000611482 3087 ntBASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.3□□□□□ -0.44
CLDND2Q8NHS1 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms