Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 TLE1P1-201ENST00000422965 589 ntBASIC12.49□□□□□ -0.41
BEST4Q8NFU0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 FAM86LP-201ENST00000478302 853 ntBASIC12.49□□□□□ -0.41
BEST4Q8NFU0 AC112482.1-201ENST00000492080 688 ntBASIC12.49□□□□□ -0.41
BEST4Q8NFU0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 AC022616.1-201ENST00000518688 554 ntBASIC12.49□□□□□ -0.41
BEST4Q8NFU0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 AL049840.4-201ENST00000602422 811 ntBASIC12.49□□□□□ -0.41
BEST4Q8NFU0 AC093813.1-201ENST00000605066 256 ntBASIC12.49□□□□□ -0.41
BEST4Q8NFU0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 BX539320.1-201ENST00000623759 877 ntBASIC12.49□□□□□ -0.41
BEST4Q8NFU0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 PRSS30P-206ENST00000641773 873 ntBASIC12.49□□□□□ -0.41
BEST4Q8NFU0 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.49□□□□□ -0.41
BEST4Q8NFU0 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BEST4Q8NFU0 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 AC092053.3-201ENST00000641308 4975 ntBASIC12.48□□□□□ -0.41
BEST4Q8NFU0 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 KRT8P35-201ENST00000483942 1338 ntBASIC12.48□□□□□ -0.41
BEST4Q8NFU0 MRPL37P1-201ENST00000592451 1337 ntBASIC12.48□□□□□ -0.41
BEST4Q8NFU0 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.48□□□□□ -0.41
BEST4Q8NFU0 CNN2P11-201ENST00000429351 262 ntBASIC12.48□□□□□ -0.41
BEST4Q8NFU0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.48□□□□□ -0.41
BEST4Q8NFU0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BEST4Q8NFU0 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 BTBD7P1-201ENST00000447253 1453 ntBASIC12.47□□□□□ -0.41
BEST4Q8NFU0 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms