Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 AC027237.1-201ENST00000560942 655 ntBASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 AC138627.1-207ENST00000641560 1006 ntBASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 AC010327.5-201ENST00000586923 3061 ntBASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 ACTG1P2-201ENST00000415776 1125 ntBASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 ACTG1P11-201ENST00000425411 1125 ntBASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 AC022447.6-201ENST00000515522 438 ntBASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 AL354702.1-201ENST00000442006 1960 ntBASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM48Q8IWZ4 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 AC018629.1-201ENST00000623381 1736 ntBASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 AHCYP4-201ENST00000419201 1315 ntBASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 CYP4F23P-201ENST00000593402 1579 ntBASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms