Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 TMBIM7P-202ENST00000641474 1516 ntBASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 AL035633.1-201ENST00000406139 838 ntBASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 CTBP2P5-201ENST00000454986 1264 ntBASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 AC104506.1-201ENST00000609247 429 ntBASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00346Q8IVM7 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
LINC00346Q8IVM7 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00346Q8IVM7 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00346Q8IVM7 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.77□□□□□ -0.36
LINC00346Q8IVM7 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00346Q8IVM7 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.77□□□□□ -0.36
LINC00346Q8IVM7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00346Q8IVM7 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00346Q8IVM7 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.77□□□□□ -0.36
LINC00346Q8IVM7 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
LINC00346Q8IVM7 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00346Q8IVM7 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.77□□□□□ -0.36
LINC00346Q8IVM7 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00346Q8IVM7 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.77□□□□□ -0.36
LINC00346Q8IVM7 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
LINC00346Q8IVM7 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00346Q8IVM7 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 AC234783.1-201ENST00000441761 496 ntBASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 COX20P2-201ENST00000452636 358 ntBASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 AP000812.2-201ENST00000538934 718 ntBASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms