Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 GOLGA8EP-201ENST00000530246 1959 ntBASIC10.22□□□□□ -0.77
RPL39P62891 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RPL39P62891 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC10.22□□□□□ -0.77
RPL39P62891 AC064801.2-201ENST00000625052 1303 ntBASIC10.22□□□□□ -0.77
RPL39P62891 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC10.22□□□□□ -0.77
RPL39P62891 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RPL39P62891 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
RPL39P62891 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
RPL39P62891 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RPL39P62891 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RPL39P62891 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
RPL39P62891 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RPL39P62891 AC100757.3-201ENST00000622361 1406 ntBASIC10.22□□□□□ -0.77
RPL39P62891 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
RPL39P62891 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RPL39P62891 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC10.22□□□□□ -0.77
RPL39P62891 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RPL39P62891 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
RPL39P62891 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC10.22□□□□□ -0.77
RPL39P62891 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RPL39P62891 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RPL39P62891 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC10.22□□□□□ -0.77
RPL39P62891 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RPL39P62891 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC10.22□□□□□ -0.77
RPL39P62891 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
RPL39P62891 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
RPL39P62891 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
RPL39P62891 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RPL39P62891 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC10.21□□□□□ -0.77
RPL39P62891 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
RPL39P62891 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
RPL39P62891 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
RPL39P62891 AC020910.5-201ENST00000623668 1865 ntBASIC10.21□□□□□ -0.77
RPL39P62891 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC10.21□□□□□ -0.77
RPL39P62891 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RPL39P62891 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
RPL39P62891 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
RPL39P62891 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
RPL39P62891 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RPL39P62891 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
RPL39P62891 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
RPL39P62891 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RPL39P62891 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
RPL39P62891 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
RPL39P62891 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
RPL39P62891 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RPL39P62891 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
RPL39P62891 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
RPL39P62891 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC10.21□□□□□ -0.77
RPL39P62891 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RPL39P62891 RN7SKP230-201ENST00000365642 335 ntBASIC10.21□□□□□ -0.77
RPL39P62891 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC10.21□□□□□ -0.77
RPL39P62891 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC10.21□□□□□ -0.77
RPL39P62891 TEX30-203ENST00000376022 828 ntTSL 2 BASIC10.21□□□□□ -0.77
RPL39P62891 KRT18P13-201ENST00000400056 1290 ntBASIC10.21□□□□□ -0.77
RPL39P62891 AC211486.1-202ENST00000416371 468 ntBASIC10.21□□□□□ -0.77
RPL39P62891 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC10.21□□□□□ -0.77
RPL39P62891 AC092580.3-201ENST00000430932 139 ntBASIC10.21□□□□□ -0.77
RPL39P62891 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC10.21□□□□□ -0.77
RPL39P62891 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
RPL39P62891 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC10.21□□□□□ -0.77
RPL39P62891 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC10.21□□□□□ -0.77
RPL39P62891 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC10.21□□□□□ -0.77
RPL39P62891 KLF2P3-201ENST00000451977 1087 ntBASIC10.21□□□□□ -0.77
RPL39P62891 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC10.21□□□□□ -0.77
RPL39P62891 AC211476.1-201ENST00000503899 468 ntBASIC10.21□□□□□ -0.77
RPL39P62891 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC10.21□□□□□ -0.77
RPL39P62891 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC10.21□□□□□ -0.77
RPL39P62891 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC10.21□□□□□ -0.77
RPL39P62891 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC10.21□□□□□ -0.77
RPL39P62891 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC10.21□□□□□ -0.77
RPL39P62891 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC10.21□□□□□ -0.77
RPL39P62891 KLK3-207ENST00000595952 969 ntTSL 3 BASIC10.21□□□□□ -0.77
RPL39P62891 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC10.21□□□□□ -0.77
RPL39P62891 AL121894.2-201ENST00000602977 491 ntBASIC10.21□□□□□ -0.77
RPL39P62891 AC027612.4-201ENST00000605371 583 ntBASIC10.21□□□□□ -0.77
RPL39P62891 BAP1-211ENST00000615113 489 ntBASIC10.21□□□□□ -0.77
RPL39P62891 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC10.21□□□□□ -0.78
RPL39P62891 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
RPL39P62891 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
RPL39P62891 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC10.21□□□□□ -0.78
RPL39P62891 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
RPL39P62891 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
RPL39P62891 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
RPL39P62891 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
RPL39P62891 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
RPL39P62891 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
RPL39P62891 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
RPL39P62891 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
RPL39P62891 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
RPL39P62891 MARK2P9-201ENST00000430958 1727 ntBASIC10.21□□□□□ -0.78
RPL39P62891 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC10.21□□□□□ -0.78
RPL39P62891 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
RPL39P62891 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
RPL39P62891 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
RPL39P62891 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC10.21□□□□□ -0.78
RPL39P62891 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC10.21□□□□□ -0.78
RPL39P62891 INTS4P2-202ENST00000614726 2019 ntBASIC10.21□□□□□ -0.78
RPL39P62891 AC004623.1-201ENST00000624592 2127 ntBASIC10.21□□□□□ -0.78
RPL39P62891 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC10.21□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms