Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LINC00115-201ENST00000473798 1317 ntBASIC12.98□□□□□ -0.33
SUMO3P55854 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SUMO3P55854 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SUMO3P55854 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SUMO3P55854 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SUMO3P55854 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SUMO3P55854 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SUMO3P55854 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SUMO3P55854 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SUMO3P55854 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.98□□□□□ -0.33
SUMO3P55854 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SUMO3P55854 AKR7A2P1-201ENST00000460134 915 ntBASIC12.98□□□□□ -0.33
SUMO3P55854 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SUMO3P55854 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.98□□□□□ -0.33
SUMO3P55854 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SUMO3P55854 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.98□□□□□ -0.33
SUMO3P55854 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SUMO3P55854 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SUMO3P55854 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.98□□□□□ -0.33
SUMO3P55854 MIR4525-201ENST00000580000 75 ntBASIC12.98□□□□□ -0.33
SUMO3P55854 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.98□□□□□ -0.33
SUMO3P55854 AC091544.8-201ENST00000619490 361 ntBASIC12.98□□□□□ -0.33
SUMO3P55854 MIR6799-201ENST00000620297 69 ntBASIC12.98□□□□□ -0.33
SUMO3P55854 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.98□□□□□ -0.33
SUMO3P55854 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SUMO3P55854 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SUMO3P55854 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.98□□□□□ -0.33
SUMO3P55854 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.98□□□□□ -0.33
SUMO3P55854 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.98□□□□□ -0.33
SUMO3P55854 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SUMO3P55854 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SUMO3P55854 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.98□□□□□ -0.33
SUMO3P55854 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SUMO3P55854 LINC01165-201ENST00000445190 1623 ntBASIC12.98□□□□□ -0.33
SUMO3P55854 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SUMO3P55854 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SUMO3P55854 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SUMO3P55854 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.98□□□□□ -0.33
SUMO3P55854 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SUMO3P55854 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
SUMO3P55854 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SUMO3P55854 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.97□□□□□ -0.33
SUMO3P55854 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.97□□□□□ -0.33
SUMO3P55854 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.97□□□□□ -0.33
SUMO3P55854 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.97□□□□□ -0.33
SUMO3P55854 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SUMO3P55854 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.97□□□□□ -0.33
SUMO3P55854 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SUMO3P55854 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 FRMPD2B-201ENST00000431305 1347 ntBASIC12.97□□□□□ -0.33
SUMO3P55854 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SUMO3P55854 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.97□□□□□ -0.33
SUMO3P55854 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.97□□□□□ -0.33
SUMO3P55854 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.97□□□□□ -0.33
SUMO3P55854 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SUMO3P55854 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 AL596276.2-201ENST00000447525 331 ntBASIC12.97□□□□□ -0.33
SUMO3P55854 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.97□□□□□ -0.33
SUMO3P55854 CHCHD2P2-201ENST00000503744 321 ntBASIC12.97□□□□□ -0.33
SUMO3P55854 KRT8P1-201ENST00000557533 1207 ntBASIC12.97□□□□□ -0.33
SUMO3P55854 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.97□□□□□ -0.33
SUMO3P55854 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.97□□□□□ -0.33
SUMO3P55854 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.97□□□□□ -0.33
SUMO3P55854 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.97□□□□□ -0.33
SUMO3P55854 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
SUMO3P55854 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.97□□□□□ -0.33
SUMO3P55854 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
SUMO3P55854 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SUMO3P55854 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SUMO3P55854 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.97□□□□□ -0.33
SUMO3P55854 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SUMO3P55854 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.97□□□□□ -0.33
SUMO3P55854 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms