Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.43■□□□□ 0.06
SSR1P43307 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SSR1P43307 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 RN7SKP175-201ENST00000408472 289 ntBASIC15.43■□□□□ 0.06
SSR1P43307 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.43■□□□□ 0.06
SSR1P43307 FAM197Y7-201ENST00000432892 766 ntBASIC15.43■□□□□ 0.06
SSR1P43307 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.43■□□□□ 0.06
SSR1P43307 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
SSR1P43307 FTH1P14-201ENST00000482930 551 ntBASIC15.43■□□□□ 0.06
SSR1P43307 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SSR1P43307 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SSR1P43307 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 AC106820.3-201ENST00000561653 397 ntBASIC15.43■□□□□ 0.06
SSR1P43307 AC103988.2-201ENST00000561804 725 ntBASIC15.43■□□□□ 0.06
SSR1P43307 GNRHR2-203ENST00000581100 1187 ntBASIC15.43■□□□□ 0.06
SSR1P43307 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SSR1P43307 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SSR1P43307 AC008735.3-201ENST00000596646 500 ntBASIC15.43■□□□□ 0.06
SSR1P43307 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.43■□□□□ 0.06
SSR1P43307 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.43■□□□□ 0.06
SSR1P43307 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.43■□□□□ 0.06
SSR1P43307 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SSR1P43307 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 DNM1P41-201ENST00000623634 3350 ntBASIC15.43■□□□□ 0.06
SSR1P43307 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC15.43■□□□□ 0.06
SSR1P43307 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SSR1P43307 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.43■□□□□ 0.06
SSR1P43307 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.43■□□□□ 0.06
SSR1P43307 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SSR1P43307 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SSR1P43307 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC15.42■□□□□ 0.06
SSR1P43307 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SSR1P43307 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 AC011474.4-201ENST00000623523 2076 ntBASIC15.42■□□□□ 0.06
SSR1P43307 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SSR1P43307 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC15.42■□□□□ 0.06
SSR1P43307 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.42■□□□□ 0.06
SSR1P43307 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SSR1P43307 AC020910.6-201ENST00000623084 1459 ntBASIC15.42■□□□□ 0.06
SSR1P43307 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.42■□□□□ 0.06
SSR1P43307 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.42■□□□□ 0.06
SSR1P43307 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.42■□□□□ 0.06
SSR1P43307 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.42■□□□□ 0.06
SSR1P43307 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.42■□□□□ 0.06
SSR1P43307 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
SSR1P43307 AC016694.1-201ENST00000434179 700 ntBASIC15.42■□□□□ 0.06
SSR1P43307 PUDPP3-201ENST00000445368 636 ntBASIC15.42■□□□□ 0.06
SSR1P43307 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.42■□□□□ 0.06
SSR1P43307 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.42■□□□□ 0.06
SSR1P43307 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.42■□□□□ 0.06
SSR1P43307 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SSR1P43307 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SSR1P43307 AP005018.1-201ENST00000525475 301 ntBASIC15.42■□□□□ 0.06
SSR1P43307 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.42■□□□□ 0.06
SSR1P43307 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.42■□□□□ 0.06
SSR1P43307 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.42■□□□□ 0.06
SSR1P43307 AC233724.13-201ENST00000598383 410 ntBASIC15.42■□□□□ 0.06
SSR1P43307 MIR6074-201ENST00000612054 107 ntBASIC15.42■□□□□ 0.06
SSR1P43307 AC244669.2-201ENST00000612320 853 ntBASIC15.42■□□□□ 0.06
SSR1P43307 AC138951.2-201ENST00000623455 1161 ntBASIC15.42■□□□□ 0.06
SSR1P43307 AC002472.3-201ENST00000640124 621 ntBASIC15.42■□□□□ 0.06
SSR1P43307 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.42■□□□□ 0.06
SSR1P43307 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.42■□□□□ 0.06
SSR1P43307 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.42■□□□□ 0.06
SSR1P43307 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms