Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXA6P31267 AC008741.2-201ENST00000612792 3115 ntBASIC13.95□□□□□ -0.18
HOXA6P31267 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXA6P31267 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.94□□□□□ -0.18
HOXA6P31267 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HOXA6P31267 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.94□□□□□ -0.18
HOXA6P31267 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
HOXA6P31267 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.94□□□□□ -0.18
HOXA6P31267 FAM226B-201ENST00000602508 1490 ntBASIC13.94□□□□□ -0.18
HOXA6P31267 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.94□□□□□ -0.18
HOXA6P31267 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HOXA6P31267 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
HOXA6P31267 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HOXA6P31267 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
HOXA6P31267 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 HLA-DMA-202ENST00000395303 1007 ntBASIC13.94□□□□□ -0.18
HOXA6P31267 MIR1307-201ENST00000408840 149 ntBASIC13.94□□□□□ -0.18
HOXA6P31267 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC13.94□□□□□ -0.18
HOXA6P31267 HMGA1P1-201ENST00000415560 1062 ntBASIC13.94□□□□□ -0.18
HOXA6P31267 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC13.94□□□□□ -0.18
HOXA6P31267 CDCA4P4-201ENST00000435216 680 ntBASIC13.94□□□□□ -0.18
HOXA6P31267 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 AC015818.1-201ENST00000451011 244 ntBASIC13.94□□□□□ -0.18
HOXA6P31267 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 RN7SL351P-201ENST00000469306 248 ntBASIC13.94□□□□□ -0.18
HOXA6P31267 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC13.94□□□□□ -0.18
HOXA6P31267 GGNBP1-204ENST00000613113 887 ntBASIC13.94□□□□□ -0.18
HOXA6P31267 AC026336.4-201ENST00000624565 1050 ntBASIC13.94□□□□□ -0.18
HOXA6P31267 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC13.94□□□□□ -0.18
HOXA6P31267 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.94□□□□□ -0.18
HOXA6P31267 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HOXA6P31267 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 AL109954.1-202ENST00000564051 2148 ntBASIC13.94□□□□□ -0.18
HOXA6P31267 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC13.94□□□□□ -0.18
HOXA6P31267 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
HOXA6P31267 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HOXA6P31267 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HOXA6P31267 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HOXA6P31267 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HOXA6P31267 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.93□□□□□ -0.18
HOXA6P31267 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
HOXA6P31267 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.93□□□□□ -0.18
HOXA6P31267 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 U3.5-201ENST00000363448 216 ntBASIC13.93□□□□□ -0.18
HOXA6P31267 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.93□□□□□ -0.18
HOXA6P31267 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HOXA6P31267 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC13.93□□□□□ -0.18
HOXA6P31267 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 AL157823.1-201ENST00000403727 628 ntBASIC13.93□□□□□ -0.18
HOXA6P31267 HNRNPA1P21-201ENST00000424115 961 ntBASIC13.93□□□□□ -0.18
HOXA6P31267 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 EEF1DP5-201ENST00000431410 772 ntBASIC13.93□□□□□ -0.18
HOXA6P31267 EEF1DP2-201ENST00000433698 843 ntBASIC13.93□□□□□ -0.18
HOXA6P31267 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 AC133141.1-201ENST00000443015 339 ntBASIC13.93□□□□□ -0.18
HOXA6P31267 TBC1D3P6-201ENST00000505954 962 ntBASIC13.93□□□□□ -0.18
HOXA6P31267 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 AC120498.7-201ENST00000562876 330 ntBASIC13.93□□□□□ -0.18
HOXA6P31267 MIR4746-201ENST00000579802 71 ntBASIC13.93□□□□□ -0.18
HOXA6P31267 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC13.93□□□□□ -0.18
HOXA6P31267 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC13.93□□□□□ -0.18
HOXA6P31267 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms