Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 USE1-206ENST00000595101 1776 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB4AP20338 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB4AP20338 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 AL359641.1-201ENST00000412509 1558 ntBASIC11.09□□□□□ -0.63
RAB4AP20338 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
RAB4AP20338 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
RAB4AP20338 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.09□□□□□ -0.63
RAB4AP20338 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
RAB4AP20338 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB4AP20338 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.09□□□□□ -0.63
RAB4AP20338 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
RAB4AP20338 AC074386.1-202ENST00000463561 864 ntBASIC11.09□□□□□ -0.63
RAB4AP20338 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC11.09□□□□□ -0.63
RAB4AP20338 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.09□□□□□ -0.63
RAB4AP20338 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB4AP20338 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB4AP20338 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.09□□□□□ -0.63
RAB4AP20338 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 AC015910.1-201ENST00000579400 975 ntBASIC11.09□□□□□ -0.63
RAB4AP20338 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 AL121912.1-201ENST00000603683 238 ntBASIC11.09□□□□□ -0.63
RAB4AP20338 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB4AP20338 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.09□□□□□ -0.63
RAB4AP20338 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
RAB4AP20338 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB4AP20338 GPR156-202ENST00000461057 2525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 PDXK-209ENST00000467908 7194 ntTSL 3 BASIC11.09□□□□□ -0.63
RAB4AP20338 APC2-203ENST00000535453 11656 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.09□□□□□ -0.63
RAB4AP20338 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
RAB4AP20338 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 PER1-202ENST00000354903 3115 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB4AP20338 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
RAB4AP20338 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
RAB4AP20338 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 EPHA5-205ENST00000613740 8355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 CNOT4-203ENST00000361528 2215 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.08□□□□□ -0.64
RAB4AP20338 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
RAB4AP20338 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 FO393414.2-201ENST00000405153 598 ntBASIC11.08□□□□□ -0.64
RAB4AP20338 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.08□□□□□ -0.64
RAB4AP20338 SMN2-210ENST00000511812 867 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
RAB4AP20338 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.08□□□□□ -0.64
RAB4AP20338 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC11.08□□□□□ -0.64
RAB4AP20338 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.08□□□□□ -0.64
RAB4AP20338 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 GREB1L-202ENST00000424526 6052 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
RAB4AP20338 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC11.08□□□□□ -0.64
RAB4AP20338 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 PPARD-205ENST00000448077 3516 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 LINC-PINT-208ENST00000451786 3505 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 TAF5L-204ENST00000366676 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms