Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RETP07949 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RETP07949 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RETP07949 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RETP07949 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
RETP07949 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.49□□□□□ -0.09
RETP07949 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 AHCYP4-201ENST00000419201 1315 ntBASIC14.49□□□□□ -0.09
RETP07949 INTS4P1-203ENST00000641008 3683 ntBASIC14.49□□□□□ -0.09
RETP07949 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RETP07949 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RETP07949 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.49□□□□□ -0.09
RETP07949 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RETP07949 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC14.49□□□□□ -0.09
RETP07949 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.49□□□□□ -0.09
RETP07949 STK16-203ENST00000409516 895 ntTSL 2 BASIC14.49□□□□□ -0.09
RETP07949 DUX4L50-201ENST00000455245 715 ntBASIC14.49□□□□□ -0.09
RETP07949 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC14.49□□□□□ -0.09
RETP07949 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.49□□□□□ -0.09
RETP07949 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
RETP07949 AC005041.3-201ENST00000606287 649 ntBASIC14.49□□□□□ -0.09
RETP07949 AC011471.3-201ENST00000623576 402 ntBASIC14.49□□□□□ -0.09
RETP07949 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 AC018442.1-201ENST00000421439 2061 ntBASIC14.49□□□□□ -0.09
RETP07949 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
RETP07949 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 AC018529.2-202ENST00000611482 3087 ntBASIC14.49□□□□□ -0.09
RETP07949 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.49□□□□□ -0.09
RETP07949 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.49□□□□□ -0.09
RETP07949 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 BEND3P1-201ENST00000421591 1944 ntBASIC14.49□□□□□ -0.09
RETP07949 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RETP07949 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
RETP07949 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RETP07949 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RETP07949 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RETP07949 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RETP07949 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RETP07949 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RETP07949 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RETP07949 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
RETP07949 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RETP07949 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RETP07949 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RETP07949 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RETP07949 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RETP07949 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RETP07949 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RETP07949 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.48□□□□□ -0.09
RETP07949 COX20P1-201ENST00000366529 357 ntBASIC14.48□□□□□ -0.09
RETP07949 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RETP07949 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC14.48□□□□□ -0.09
RETP07949 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RETP07949 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.48□□□□□ -0.09
RETP07949 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.48□□□□□ -0.09
RETP07949 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.48□□□□□ -0.09
RETP07949 RPL35P9-201ENST00000446059 350 ntBASIC14.48□□□□□ -0.09
RETP07949 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.48□□□□□ -0.09
RETP07949 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC14.48□□□□□ -0.09
RETP07949 RNA5SP417-201ENST00000516459 108 ntBASIC14.48□□□□□ -0.09
RETP07949 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC14.48□□□□□ -0.09
RETP07949 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.48□□□□□ -0.09
RETP07949 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC14.48□□□□□ -0.09
RETP07949 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.48□□□□□ -0.09
RETP07949 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC14.48□□□□□ -0.09
RETP07949 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RETP07949 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC14.48□□□□□ -0.09
RETP07949 AC055811.3-201ENST00000584952 686 ntBASIC14.48□□□□□ -0.09
RETP07949 AP005212.2-201ENST00000584979 510 ntBASIC14.48□□□□□ -0.09
RETP07949 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RETP07949 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.48□□□□□ -0.09
RETP07949 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms