Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DOAP06340 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOAP06340 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DOAP06340 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DOAP06340 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOAP06340 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DOAP06340 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOAP06340 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOAP06340 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOAP06340 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOAP06340 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOAP06340 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
HLA-DOAP06340 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
HLA-DOAP06340 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
HLA-DOAP06340 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HLA-DOAP06340 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.83■□□□□ 0.29
HLA-DOAP06340 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
HLA-DOAP06340 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.83■□□□□ 0.29
HLA-DOAP06340 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.83■□□□□ 0.29
HLA-DOAP06340 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOAP06340 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOAP06340 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOAP06340 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOAP06340 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOAP06340 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOAP06340 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.83■□□□□ 0.28
HLA-DOAP06340 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 AC103592.1-201ENST00000394513 664 ntBASIC16.83■□□□□ 0.28
HLA-DOAP06340 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOAP06340 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOAP06340 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 SCARNA12-201ENST00000459155 270 ntBASIC16.83■□□□□ 0.28
HLA-DOAP06340 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOAP06340 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 AC145285.5-201ENST00000562217 361 ntBASIC16.83■□□□□ 0.28
HLA-DOAP06340 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOAP06340 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 AC046158.3-201ENST00000624947 2558 ntBASIC16.83■□□□□ 0.28
HLA-DOAP06340 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOAP06340 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOAP06340 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOAP06340 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOAP06340 TNRC18P2-201ENST00000417666 2714 ntBASIC16.83■□□□□ 0.28
HLA-DOAP06340 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HLA-DOAP06340 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOAP06340 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DOAP06340 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DOAP06340 AC015656.1-201ENST00000624209 3578 ntBASIC16.82■□□□□ 0.28
HLA-DOAP06340 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOAP06340 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOAP06340 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOAP06340 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOAP06340 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOAP06340 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DOAP06340 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOAP06340 RPL13AP3-202ENST00000494676 1473 ntBASIC16.82■□□□□ 0.28
HLA-DOAP06340 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOAP06340 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOAP06340 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOAP06340 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOAP06340 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.82■□□□□ 0.28
HLA-DOAP06340 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.82■□□□□ 0.28
HLA-DOAP06340 PPP1R2P4-201ENST00000424051 595 ntBASIC16.82■□□□□ 0.28
HLA-DOAP06340 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.82■□□□□ 0.28
HLA-DOAP06340 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DOAP06340 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DOAP06340 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DOAP06340 CR383656.3-201ENST00000551315 183 ntBASIC16.82■□□□□ 0.28
HLA-DOAP06340 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DOAP06340 AL161773.1-201ENST00000624845 863 ntBASIC16.82■□□□□ 0.28
HLA-DOAP06340 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DOAP06340 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HLA-DOAP06340 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DOAP06340 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DOAP06340 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOAP06340 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HLA-DOAP06340 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HLA-DOAP06340 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DOAP06340 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms