Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.12□□□□□ -0.47
CD74P04233 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CD74P04233 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 AC005014.1-201ENST00000432006 2976 ntBASIC12.12□□□□□ -0.47
CD74P04233 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.12□□□□□ -0.47
CD74P04233 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.12□□□□□ -0.47
CD74P04233 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CD74P04233 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 AC109322.1-201ENST00000524499 1264 ntBASIC12.12□□□□□ -0.47
CD74P04233 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.12□□□□□ -0.47
CD74P04233 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
CD74P04233 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.12□□□□□ -0.47
CD74P04233 AC135586.1-201ENST00000539323 574 ntBASIC12.12□□□□□ -0.47
CD74P04233 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.12□□□□□ -0.47
CD74P04233 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.12□□□□□ -0.47
CD74P04233 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.12□□□□□ -0.47
CD74P04233 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.12□□□□□ -0.47
CD74P04233 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
CD74P04233 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.12□□□□□ -0.47
CD74P04233 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.12□□□□□ -0.47
CD74P04233 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.12□□□□□ -0.47
CD74P04233 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 SALL4P6-201ENST00000429385 1691 ntBASIC12.12□□□□□ -0.47
CD74P04233 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.12□□□□□ -0.47
CD74P04233 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.12□□□□□ -0.47
CD74P04233 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CD74P04233 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CD74P04233 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.12□□□□□ -0.47
CD74P04233 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.11□□□□□ -0.47
CD74P04233 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.11□□□□□ -0.47
CD74P04233 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CD74P04233 AC002350.2-201ENST00000623894 1828 ntBASIC12.11□□□□□ -0.47
CD74P04233 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CD74P04233 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.11□□□□□ -0.47
CD74P04233 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
CD74P04233 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CD74P04233 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.11□□□□□ -0.47
CD74P04233 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CD74P04233 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CD74P04233 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 AC025183.3-201ENST00000623526 1482 ntBASIC12.11□□□□□ -0.47
CD74P04233 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.11□□□□□ -0.47
CD74P04233 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.11□□□□□ -0.47
CD74P04233 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.11□□□□□ -0.47
CD74P04233 AC254562.1-201ENST00000417586 456 ntBASIC12.11□□□□□ -0.47
CD74P04233 AC107890.1-201ENST00000422478 521 ntBASIC12.11□□□□□ -0.47
CD74P04233 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.11□□□□□ -0.47
CD74P04233 AC245100.3-201ENST00000441281 285 ntBASIC12.11□□□□□ -0.47
CD74P04233 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.11□□□□□ -0.47
CD74P04233 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.11□□□□□ -0.47
CD74P04233 AC097493.3-201ENST00000509725 367 ntBASIC12.11□□□□□ -0.47
CD74P04233 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.11□□□□□ -0.47
CD74P04233 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.11□□□□□ -0.47
CD74P04233 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.11□□□□□ -0.47
CD74P04233 AC015911.4-201ENST00000588022 1070 ntBASIC12.11□□□□□ -0.47
CD74P04233 AC138466.3-201ENST00000619983 221 ntBASIC12.11□□□□□ -0.47
CD74P04233 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.11□□□□□ -0.47
CD74P04233 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
CD74P04233 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CD74P04233 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
CD74P04233 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 AP001972.5-201ENST00000624624 2338 ntBASIC12.11□□□□□ -0.47
CD74P04233 AC104758.3-203ENST00000562938 2123 ntBASIC12.11□□□□□ -0.47
CD74P04233 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CD74P04233 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.11□□□□□ -0.47
CD74P04233 FKBP4P6-201ENST00000457486 1332 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms