Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC11.42□□□□□ -0.58
IFNA1P01562 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC11.42□□□□□ -0.58
IFNA1P01562 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.42□□□□□ -0.58
IFNA1P01562 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.42□□□□□ -0.58
IFNA1P01562 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC11.42□□□□□ -0.58
IFNA1P01562 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.42□□□□□ -0.58
IFNA1P01562 AC009955.4-201ENST00000597192 544 ntBASIC11.42□□□□□ -0.58
IFNA1P01562 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 AC055717.3-201ENST00000622967 595 ntBASIC11.42□□□□□ -0.58
IFNA1P01562 LINC00628-201ENST00000628516 1289 ntBASIC11.42□□□□□ -0.58
IFNA1P01562 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
IFNA1P01562 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
IFNA1P01562 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.42□□□□□ -0.58
IFNA1P01562 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC11.42□□□□□ -0.58
IFNA1P01562 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC11.42□□□□□ -0.58
IFNA1P01562 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC11.42□□□□□ -0.58
IFNA1P01562 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 AC026271.4-201ENST00000578214 1833 ntBASIC11.42□□□□□ -0.58
IFNA1P01562 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC11.42□□□□□ -0.58
IFNA1P01562 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
IFNA1P01562 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11.41□□□□□ -0.58
IFNA1P01562 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
IFNA1P01562 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
IFNA1P01562 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC11.41□□□□□ -0.58
IFNA1P01562 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 AC093525.8-201ENST00000624099 1342 ntBASIC11.41□□□□□ -0.58
IFNA1P01562 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
IFNA1P01562 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC11.41□□□□□ -0.58
IFNA1P01562 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
IFNA1P01562 AC115284.2-201ENST00000624646 2054 ntBASIC11.41□□□□□ -0.58
IFNA1P01562 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
IFNA1P01562 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
IFNA1P01562 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC11.41□□□□□ -0.58
IFNA1P01562 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC11.41□□□□□ -0.58
IFNA1P01562 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC11.41□□□□□ -0.58
IFNA1P01562 RNA5SP415-201ENST00000517246 115 ntBASIC11.41□□□□□ -0.58
IFNA1P01562 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC11.41□□□□□ -0.58
IFNA1P01562 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC11.41□□□□□ -0.58
IFNA1P01562 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
IFNA1P01562 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC11.41□□□□□ -0.58
IFNA1P01562 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC11.41□□□□□ -0.58
IFNA1P01562 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.41□□□□□ -0.58
IFNA1P01562 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
IFNA1P01562 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC11.41□□□□□ -0.58
IFNA1P01562 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
IFNA1P01562 AF228730.6-201ENST00000641497 218 ntBASIC11.41□□□□□ -0.58
IFNA1P01562 AC084121.3-201ENST00000641716 218 ntBASIC11.41□□□□□ -0.58
IFNA1P01562 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
IFNA1P01562 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC11.41□□□□□ -0.58
IFNA1P01562 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC11.41□□□□□ -0.58
IFNA1P01562 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC11.41□□□□□ -0.58
IFNA1P01562 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
IFNA1P01562 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
IFNA1P01562 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
IFNA1P01562 AC027369.3-201ENST00000530465 3707 ntBASIC11.4□□□□□ -0.58
IFNA1P01562 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
IFNA1P01562 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
IFNA1P01562 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC11.4□□□□□ -0.58
IFNA1P01562 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
IFNA1P01562 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
IFNA1P01562 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
IFNA1P01562 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms