Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGC4Q9Y5F7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PCDHGC4Q9Y5F7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PCDHGC4Q9Y5F7 MST1P2-201ENST00000457982 2291 ntBASIC14.52□□□□□ -0.08
PCDHGC4Q9Y5F7 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
PCDHGC4Q9Y5F7 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 AL008707.1-201ENST00000422498 534 ntBASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 TSPY25P-201ENST00000429463 745 ntBASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 LINC01165-201ENST00000445190 1623 ntBASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGC4Q9Y5F7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 AL928921.2-201ENST00000641325 2442 ntBASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 TUBB8P4-201ENST00000511806 1324 ntBASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 AC007326.2-201ENST00000624224 7579 ntBASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 RN7SL11P-201ENST00000471305 293 ntBASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGC4Q9Y5F7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms