Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL391647.1-201ENST00000395664 511 ntBASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 IGHV3-37-201ENST00000518544 340 ntBASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 AL133467.4-201ENST00000602953 725 ntBASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 AC015656.1-201ENST00000624209 3578 ntBASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 LINC01230-201ENST00000625222 3017 ntBASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 WT1-AS_6.1-201ENST00000614919 121 ntBASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 AC009560.1-201ENST00000620208 434 ntBASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 AL359881.3-201ENST00000602640 1721 ntBASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 LINC00265-2P-201ENST00000413372 782 ntBASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 MIR2392-201ENST00000584881 84 ntBASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 KRT8P24-201ENST00000560290 1559 ntBASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KIAA1549Q9HCM3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 PIN4P1-201ENST00000451079 396 ntBASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 AC007952.4-201ENST00000573866 637 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms