Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
AP3S1Q92572 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 AC106818.1-201ENST00000623223 3242 ntBASIC12.72□□□□□ -0.37
AP3S1Q92572 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
AP3S1Q92572 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
AP3S1Q92572 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.72□□□□□ -0.37
AP3S1Q92572 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 AL139094.1-201ENST00000405549 1188 ntBASIC12.72□□□□□ -0.37
AP3S1Q92572 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.72□□□□□ -0.37
AP3S1Q92572 AC003958.1-201ENST00000435883 421 ntBASIC12.72□□□□□ -0.37
AP3S1Q92572 FAM210CP-201ENST00000445714 574 ntBASIC12.72□□□□□ -0.37
AP3S1Q92572 KRT18P35-201ENST00000510488 1269 ntBASIC12.72□□□□□ -0.37
AP3S1Q92572 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.72□□□□□ -0.37
AP3S1Q92572 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.72□□□□□ -0.37
AP3S1Q92572 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.72□□□□□ -0.37
AP3S1Q92572 AC009955.4-201ENST00000597192 544 ntBASIC12.72□□□□□ -0.37
AP3S1Q92572 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 PRSS30P-206ENST00000641773 873 ntBASIC12.72□□□□□ -0.37
AP3S1Q92572 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.72□□□□□ -0.37
AP3S1Q92572 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.72□□□□□ -0.37
AP3S1Q92572 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.72□□□□□ -0.37
AP3S1Q92572 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.72□□□□□ -0.37
AP3S1Q92572 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
AP3S1Q92572 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.72□□□□□ -0.37
AP3S1Q92572 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.72□□□□□ -0.37
AP3S1Q92572 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
AP3S1Q92572 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
AP3S1Q92572 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.71□□□□□ -0.37
AP3S1Q92572 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S1Q92572 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S1Q92572 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S1Q92572 PI4KAP2-201ENST00000360806 2080 ntBASIC12.71□□□□□ -0.37
AP3S1Q92572 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.71□□□□□ -0.37
AP3S1Q92572 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S1Q92572 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
AP3S1Q92572 LINC02486-201ENST00000604157 3000 ntBASIC12.71□□□□□ -0.37
AP3S1Q92572 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S1Q92572 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S1Q92572 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S1Q92572 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
AP3S1Q92572 PCDHB19P-202ENST00000625133 2914 ntBASIC12.71□□□□□ -0.37
AP3S1Q92572 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.71□□□□□ -0.37
AP3S1Q92572 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S1Q92572 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S1Q92572 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.71□□□□□ -0.37
AP3S1Q92572 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
AP3S1Q92572 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S1Q92572 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
AP3S1Q92572 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.71□□□□□ -0.37
AP3S1Q92572 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.71□□□□□ -0.37
AP3S1Q92572 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S1Q92572 RN7SL618P-201ENST00000477850 296 ntBASIC12.71□□□□□ -0.37
AP3S1Q92572 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.71□□□□□ -0.37
AP3S1Q92572 SDHAP3-202ENST00000515467 728 ntBASIC12.71□□□□□ -0.37
AP3S1Q92572 TIMM17BP1-201ENST00000545713 516 ntBASIC12.71□□□□□ -0.37
AP3S1Q92572 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.71□□□□□ -0.37
AP3S1Q92572 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
AP3S1Q92572 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.71□□□□□ -0.37
AP3S1Q92572 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S1Q92572 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.71□□□□□ -0.37
AP3S1Q92572 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
AP3S1Q92572 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.71□□□□□ -0.37
AP3S1Q92572 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.71□□□□□ -0.37
AP3S1Q92572 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.71□□□□□ -0.37
AP3S1Q92572 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S1Q92572 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.71□□□□□ -0.38
AP3S1Q92572 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP3S1Q92572 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
AP3S1Q92572 PDIA3P1-201ENST00000471856 1510 ntBASIC12.71□□□□□ -0.38
AP3S1Q92572 AC004623.1-201ENST00000624592 2127 ntBASIC12.71□□□□□ -0.38
AP3S1Q92572 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP3S1Q92572 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP3S1Q92572 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
AP3S1Q92572 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
AP3S1Q92572 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.71□□□□□ -0.38
AP3S1Q92572 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms