Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC027612.2-202ENST00000445955 1199 ntBASIC17.09■□□□□ 0.33
SNED1Q8TER0 HIST1H2APS2-201ENST00000454426 370 ntBASIC17.09■□□□□ 0.33
SNED1Q8TER0 TPT1P11-201ENST00000458482 498 ntBASIC17.09■□□□□ 0.33
SNED1Q8TER0 HNRNPA1P42-201ENST00000458678 957 ntBASIC17.09■□□□□ 0.33
SNED1Q8TER0 HNRNPA3P6-201ENST00000472163 1006 ntBASIC17.09■□□□□ 0.33
SNED1Q8TER0 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNED1Q8TER0 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC17.09■□□□□ 0.33
SNED1Q8TER0 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC17.09■□□□□ 0.33
SNED1Q8TER0 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC17.09■□□□□ 0.33
SNED1Q8TER0 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC17.09■□□□□ 0.33
SNED1Q8TER0 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC17.09■□□□□ 0.33
SNED1Q8TER0 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC17.09■□□□□ 0.33
SNED1Q8TER0 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC17.09■□□□□ 0.33
SNED1Q8TER0 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC17.09■□□□□ 0.33
SNED1Q8TER0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNED1Q8TER0 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNED1Q8TER0 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC17.09■□□□□ 0.33
SNED1Q8TER0 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SNED1Q8TER0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNED1Q8TER0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.08■□□□□ 0.33
SNED1Q8TER0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNED1Q8TER0 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNED1Q8TER0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNED1Q8TER0 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC17.08■□□□□ 0.33
SNED1Q8TER0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SNED1Q8TER0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNED1Q8TER0 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNED1Q8TER0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNED1Q8TER0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
SNED1Q8TER0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNED1Q8TER0 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNED1Q8TER0 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNED1Q8TER0 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNED1Q8TER0 U3.5-201ENST00000363448 216 ntBASIC17.08■□□□□ 0.32
SNED1Q8TER0 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC17.08■□□□□ 0.32
SNED1Q8TER0 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC17.08■□□□□ 0.32
SNED1Q8TER0 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SNED1Q8TER0 HNRNPA1P56-201ENST00000505767 954 ntBASIC17.08■□□□□ 0.32
SNED1Q8TER0 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNED1Q8TER0 RN7SL121P-201ENST00000584223 273 ntBASIC17.08■□□□□ 0.32
SNED1Q8TER0 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC17.08■□□□□ 0.32
SNED1Q8TER0 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SNED1Q8TER0 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNED1Q8TER0 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNED1Q8TER0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.08■□□□□ 0.32
SNED1Q8TER0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNED1Q8TER0 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNED1Q8TER0 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNED1Q8TER0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNED1Q8TER0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SNED1Q8TER0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.08■□□□□ 0.32
SNED1Q8TER0 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNED1Q8TER0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.08■□□□□ 0.32
SNED1Q8TER0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SNED1Q8TER0 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNED1Q8TER0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SNED1Q8TER0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNED1Q8TER0 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNED1Q8TER0 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNED1Q8TER0 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNED1Q8TER0 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SNED1Q8TER0 AC020931.1-201ENST00000589622 1346 ntBASIC17.07■□□□□ 0.32
SNED1Q8TER0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNED1Q8TER0 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNED1Q8TER0 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNED1Q8TER0 AC136604.1-202ENST00000425471 771 ntBASIC17.07■□□□□ 0.32
SNED1Q8TER0 AC103563.1-201ENST00000429316 123 ntBASIC17.07■□□□□ 0.32
SNED1Q8TER0 RPSAP12-201ENST00000435879 888 ntBASIC17.07■□□□□ 0.32
SNED1Q8TER0 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNED1Q8TER0 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC17.07■□□□□ 0.32
SNED1Q8TER0 COQ10BP2-201ENST00000513804 724 ntBASIC17.07■□□□□ 0.32
SNED1Q8TER0 BAK1P2-201ENST00000532665 631 ntBASIC17.07■□□□□ 0.32
SNED1Q8TER0 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC17.07■□□□□ 0.32
SNED1Q8TER0 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC17.07■□□□□ 0.32
SNED1Q8TER0 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC17.07■□□□□ 0.32
SNED1Q8TER0 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC17.07■□□□□ 0.32
SNED1Q8TER0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNED1Q8TER0 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNED1Q8TER0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNED1Q8TER0 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC17.07■□□□□ 0.32
SNED1Q8TER0 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.07■□□□□ 0.32
SNED1Q8TER0 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC17.07■□□□□ 0.32
SNED1Q8TER0 FAM226B-201ENST00000602508 1490 ntBASIC17.07■□□□□ 0.32
SNED1Q8TER0 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNED1Q8TER0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SNED1Q8TER0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNED1Q8TER0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNED1Q8TER0 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.07■□□□□ 0.32
SNED1Q8TER0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNED1Q8TER0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNED1Q8TER0 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNED1Q8TER0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.07■□□□□ 0.32
SNED1Q8TER0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNED1Q8TER0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNED1Q8TER0 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SNED1Q8TER0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNED1Q8TER0 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC17.06■□□□□ 0.32
SNED1Q8TER0 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SNED1Q8TER0 AC133141.1-201ENST00000443015 339 ntBASIC17.06■□□□□ 0.32
SNED1Q8TER0 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms