Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 THTPA-204ENST00000554970 569 ntTSL 4 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 THTPA-206ENST00000556015 535 ntTSL 3 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 OR7E47P-204ENST00000575924 449 ntBASIC10.77□□□□□ -0.69
HIST1H2BDP58876 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 MIR5100-201ENST00000579544 119 ntBASIC10.77□□□□□ -0.69
HIST1H2BDP58876 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 DBH-202ENST00000393056 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 IKBKE-203ENST00000581977 3221 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 DSCR3-201ENST00000309117 3256 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 PCDHGB8P-202ENST00000507007 2873 ntBASIC10.77□□□□□ -0.69
HIST1H2BDP58876 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 RASAL1-201ENST00000261729 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 VDR-208ENST00000550325 3925 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 ISM2-202ENST00000342219 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 SALL4P5-201ENST00000419001 1760 ntBASIC10.76□□□□□ -0.69
HIST1H2BDP58876 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 FOXO1B-201ENST00000504678 1527 ntBASIC10.76□□□□□ -0.69
HIST1H2BDP58876 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 SSR4P1-201ENST00000415143 412 ntBASIC10.76□□□□□ -0.69
HIST1H2BDP58876 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 AC073389.1-201ENST00000595595 795 ntBASIC10.76□□□□□ -0.69
HIST1H2BDP58876 AC008667.4-201ENST00000607370 168 ntBASIC10.76□□□□□ -0.69
HIST1H2BDP58876 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 FOXO4-202ENST00000374259 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 PITX2-202ENST00000354925 3359 ntAPPRIS ALT1 TSL 2 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 INTS6L-206ENST00000639893 3904 ntTSL 5 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 NUAK2-201ENST00000367157 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 DPP3-215ENST00000541961 2676 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC10.76□□□□□ -0.69
HIST1H2BDP58876 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms