Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.46□□□□□ -0.25
PER3P56645 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.46□□□□□ -0.25
PER3P56645 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.46□□□□□ -0.25
PER3P56645 GHSR-202ENST00000427970 912 ntBASIC13.46□□□□□ -0.25
PER3P56645 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 AC104784.1-201ENST00000473096 294 ntBASIC13.46□□□□□ -0.25
PER3P56645 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.46□□□□□ -0.25
PER3P56645 AC100850.1-201ENST00000506768 649 ntBASIC13.46□□□□□ -0.25
PER3P56645 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13.46□□□□□ -0.25
PER3P56645 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
PER3P56645 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.46□□□□□ -0.25
PER3P56645 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
PER3P56645 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.46□□□□□ -0.25
PER3P56645 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 BNIP3P13-201ENST00000599968 566 ntBASIC13.46□□□□□ -0.25
PER3P56645 AL353770.1-201ENST00000614915 403 ntBASIC13.46□□□□□ -0.25
PER3P56645 AP003419.4-201ENST00000616071 517 ntBASIC13.46□□□□□ -0.25
PER3P56645 NAP1L6-202ENST00000641404 1222 ntBASIC13.46□□□□□ -0.25
PER3P56645 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
PER3P56645 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.46□□□□□ -0.25
PER3P56645 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 AC012508.2-201ENST00000567613 1472 ntBASIC13.46□□□□□ -0.25
PER3P56645 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.46□□□□□ -0.25
PER3P56645 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PER3P56645 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.46□□□□□ -0.25
PER3P56645 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PER3P56645 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PER3P56645 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PER3P56645 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PER3P56645 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
PER3P56645 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.46□□□□□ -0.26
PER3P56645 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
PER3P56645 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PER3P56645 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.46□□□□□ -0.26
PER3P56645 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PER3P56645 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
PER3P56645 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
PER3P56645 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.45□□□□□ -0.26
PER3P56645 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
PER3P56645 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.45□□□□□ -0.26
PER3P56645 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
PER3P56645 AC069218.1-201ENST00000435269 762 ntBASIC13.45□□□□□ -0.26
PER3P56645 CHMP1AP1-201ENST00000445563 662 ntBASIC13.45□□□□□ -0.26
PER3P56645 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.45□□□□□ -0.26
PER3P56645 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.45□□□□□ -0.26
PER3P56645 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.45□□□□□ -0.26
PER3P56645 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.45□□□□□ -0.26
PER3P56645 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC13.45□□□□□ -0.26
PER3P56645 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.45□□□□□ -0.26
PER3P56645 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
PER3P56645 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.45□□□□□ -0.26
PER3P56645 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC13.45□□□□□ -0.26
PER3P56645 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
PER3P56645 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.45□□□□□ -0.26
PER3P56645 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.45□□□□□ -0.26
PER3P56645 AL133499.1-201ENST00000596207 608 ntBASIC13.45□□□□□ -0.26
PER3P56645 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.45□□□□□ -0.26
PER3P56645 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 AL157414.3-201ENST00000624276 1954 ntBASIC13.45□□□□□ -0.26
PER3P56645 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
PER3P56645 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
PER3P56645 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
PER3P56645 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.45□□□□□ -0.26
PER3P56645 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
PER3P56645 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PER3P56645 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.44□□□□□ -0.26
PER3P56645 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PER3P56645 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms