Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SSR4P51571 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSR4P51571 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSR4P51571 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
SSR4P51571 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.18□□□□□ -0.3
SSR4P51571 LINC00552-201ENST00000625151 2579 ntBASIC13.18□□□□□ -0.3
SSR4P51571 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSR4P51571 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSR4P51571 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSR4P51571 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSR4P51571 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.17□□□□□ -0.3
SSR4P51571 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSR4P51571 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SSR4P51571 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SSR4P51571 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
SSR4P51571 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR4P51571 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.17□□□□□ -0.3
SSR4P51571 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SSR4P51571 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SSR4P51571 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SSR4P51571 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.17□□□□□ -0.3
SSR4P51571 MARK2P16-201ENST00000605714 1723 ntBASIC13.17□□□□□ -0.3
SSR4P51571 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SSR4P51571 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR4P51571 KRT8P31-201ENST00000504812 1408 ntBASIC13.17□□□□□ -0.3
SSR4P51571 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR4P51571 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SSR4P51571 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSR4P51571 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.17□□□□□ -0.3
SSR4P51571 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.17□□□□□ -0.3
SSR4P51571 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSR4P51571 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.17□□□□□ -0.3
SSR4P51571 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.17□□□□□ -0.3
SSR4P51571 AC019193.1-201ENST00000506678 823 ntBASIC13.17□□□□□ -0.3
SSR4P51571 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.17□□□□□ -0.3
SSR4P51571 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SSR4P51571 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.17□□□□□ -0.3
SSR4P51571 PRKXP1-201ENST00000561423 1122 ntBASIC13.17□□□□□ -0.3
SSR4P51571 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.17□□□□□ -0.3
SSR4P51571 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.17□□□□□ -0.3
SSR4P51571 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.17□□□□□ -0.3
SSR4P51571 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.17□□□□□ -0.3
SSR4P51571 AC007718.1-201ENST00000621078 280 ntBASIC13.17□□□□□ -0.3
SSR4P51571 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.17□□□□□ -0.3
SSR4P51571 BRD7P5-201ENST00000299197 1822 ntBASIC13.17□□□□□ -0.3
SSR4P51571 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.17□□□□□ -0.3
SSR4P51571 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR4P51571 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.17□□□□□ -0.3
SSR4P51571 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR4P51571 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
SSR4P51571 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
SSR4P51571 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SSR4P51571 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR4P51571 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR4P51571 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSR4P51571 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR4P51571 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR4P51571 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SSR4P51571 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SSR4P51571 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SSR4P51571 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SSR4P51571 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR4P51571 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSR4P51571 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR4P51571 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSR4P51571 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.16□□□□□ -0.3
SSR4P51571 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.16□□□□□ -0.3
SSR4P51571 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR4P51571 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR4P51571 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR4P51571 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
SSR4P51571 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR4P51571 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SSR4P51571 AC097359.2-201ENST00000604992 2389 ntBASIC13.16□□□□□ -0.3
SSR4P51571 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR4P51571 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR4P51571 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSR4P51571 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.16□□□□□ -0.3
SSR4P51571 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.16□□□□□ -0.3
SSR4P51571 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.16□□□□□ -0.3
SSR4P51571 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.16□□□□□ -0.3
SSR4P51571 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.16□□□□□ -0.3
SSR4P51571 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SSR4P51571 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR4P51571 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.16□□□□□ -0.3
SSR4P51571 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR4P51571 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.16□□□□□ -0.3
SSR4P51571 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.16□□□□□ -0.3
SSR4P51571 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR4P51571 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSR4P51571 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR4P51571 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR4P51571 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSR4P51571 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSR4P51571 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSR4P51571 AC092506.1-202ENST00000401022 528 ntBASIC13.16□□□□□ -0.3
SSR4P51571 AL807761.2-201ENST00000422849 729 ntBASIC13.16□□□□□ -0.3
SSR4P51571 FTLP1-201ENST00000449155 526 ntBASIC13.16□□□□□ -0.3
SSR4P51571 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.16□□□□□ -0.3
SSR4P51571 ALG1L13P-202ENST00000519320 584 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms