Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.72□□□□□ -0.37
CX3CR1P49238 AC015818.8-201ENST00000587907 1519 ntBASIC12.72□□□□□ -0.37
CX3CR1P49238 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.72□□□□□ -0.37
CX3CR1P49238 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CX3CR1P49238 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CX3CR1P49238 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.72□□□□□ -0.37
CX3CR1P49238 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.72□□□□□ -0.37
CX3CR1P49238 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.72□□□□□ -0.37
CX3CR1P49238 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.72□□□□□ -0.37
CX3CR1P49238 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.72□□□□□ -0.37
CX3CR1P49238 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.72□□□□□ -0.37
CX3CR1P49238 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.72□□□□□ -0.37
CX3CR1P49238 AL355994.2-201ENST00000447882 704 ntBASIC12.72□□□□□ -0.37
CX3CR1P49238 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 KRT17P7-201ENST00000451704 1104 ntBASIC12.72□□□□□ -0.37
CX3CR1P49238 TMEM198B-204ENST00000484016 896 ntBASIC12.72□□□□□ -0.37
CX3CR1P49238 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.72□□□□□ -0.37
CX3CR1P49238 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.72□□□□□ -0.37
CX3CR1P49238 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.72□□□□□ -0.37
CX3CR1P49238 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CX3CR1P49238 PPY2P-201ENST00000582808 702 ntBASIC12.72□□□□□ -0.37
CX3CR1P49238 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.72□□□□□ -0.37
CX3CR1P49238 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.72□□□□□ -0.37
CX3CR1P49238 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.72□□□□□ -0.37
CX3CR1P49238 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.72□□□□□ -0.37
CX3CR1P49238 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.72□□□□□ -0.37
CX3CR1P49238 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.72□□□□□ -0.37
CX3CR1P49238 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CX3CR1P49238 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.72□□□□□ -0.37
CX3CR1P49238 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CX3CR1P49238 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CX3CR1P49238 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
CX3CR1P49238 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 AL356585.2-201ENST00000625078 2396 ntBASIC12.72□□□□□ -0.37
CX3CR1P49238 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CX3CR1P49238 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.72□□□□□ -0.37
CX3CR1P49238 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.72□□□□□ -0.37
CX3CR1P49238 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.72□□□□□ -0.37
CX3CR1P49238 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.72□□□□□ -0.37
CX3CR1P49238 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.72□□□□□ -0.37
CX3CR1P49238 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CX3CR1P49238 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CX3CR1P49238 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.71□□□□□ -0.37
CX3CR1P49238 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CX3CR1P49238 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.71□□□□□ -0.37
CX3CR1P49238 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CX3CR1P49238 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CX3CR1P49238 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.71□□□□□ -0.37
CX3CR1P49238 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CX3CR1P49238 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CX3CR1P49238 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CX3CR1P49238 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CX3CR1P49238 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CX3CR1P49238 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CX3CR1P49238 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CX3CR1P49238 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CX3CR1P49238 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.71□□□□□ -0.37
CX3CR1P49238 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CX3CR1P49238 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CX3CR1P49238 AC105206.1-202ENST00000314927 2368 ntBASIC12.71□□□□□ -0.37
CX3CR1P49238 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
CX3CR1P49238 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CX3CR1P49238 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CX3CR1P49238 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
CX3CR1P49238 AHCYP2-201ENST00000430630 1300 ntBASIC12.71□□□□□ -0.37
CX3CR1P49238 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.71□□□□□ -0.37
CX3CR1P49238 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CX3CR1P49238 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
CX3CR1P49238 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CX3CR1P49238 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CX3CR1P49238 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.71□□□□□ -0.37
CX3CR1P49238 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CX3CR1P49238 AC006001.1-201ENST00000325130 474 ntBASIC12.71□□□□□ -0.37
CX3CR1P49238 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CX3CR1P49238 COX5BP8-201ENST00000416911 349 ntBASIC12.71□□□□□ -0.37
CX3CR1P49238 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms