Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.93■□□□□ 0.46
COL15A1P39059 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL15A1P39059 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC17.93■□□□□ 0.46
COL15A1P39059 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.93■□□□□ 0.46
COL15A1P39059 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL15A1P39059 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL15A1P39059 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC17.92■□□□□ 0.46
COL15A1P39059 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC17.92■□□□□ 0.46
COL15A1P39059 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC17.92■□□□□ 0.46
COL15A1P39059 STK24P1-201ENST00000455035 1291 ntBASIC17.92■□□□□ 0.46
COL15A1P39059 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
COL15A1P39059 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC17.92■□□□□ 0.46
COL15A1P39059 AC090136.2-201ENST00000517809 420 ntBASIC17.92■□□□□ 0.46
COL15A1P39059 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
COL15A1P39059 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC17.92■□□□□ 0.46
COL15A1P39059 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.92■□□□□ 0.46
COL15A1P39059 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC17.92■□□□□ 0.46
COL15A1P39059 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC17.92■□□□□ 0.46
COL15A1P39059 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COL15A1P39059 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 AC005912.2-201ENST00000619492 2400 ntBASIC17.92■□□□□ 0.46
COL15A1P39059 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
COL15A1P39059 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC17.92■□□□□ 0.46
COL15A1P39059 AC117503.4-201ENST00000623229 1418 ntBASIC17.92■□□□□ 0.46
COL15A1P39059 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
COL15A1P39059 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.92■□□□□ 0.46
COL15A1P39059 AL365181.1-201ENST00000564032 1828 ntBASIC17.92■□□□□ 0.46
COL15A1P39059 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
COL15A1P39059 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
COL15A1P39059 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL15A1P39059 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.92■□□□□ 0.46
COL15A1P39059 PTGER4P2-201ENST00000328411 252 ntBASIC17.91■□□□□ 0.46
COL15A1P39059 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
COL15A1P39059 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
COL15A1P39059 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC17.91■□□□□ 0.46
COL15A1P39059 OR51A9P-201ENST00000422578 911 ntBASIC17.91■□□□□ 0.46
COL15A1P39059 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC17.91■□□□□ 0.46
COL15A1P39059 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC17.91■□□□□ 0.46
COL15A1P39059 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC17.91■□□□□ 0.46
COL15A1P39059 PTGER4P3-201ENST00000458150 252 ntBASIC17.91■□□□□ 0.46
COL15A1P39059 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COL15A1P39059 SRP14-204ENST00000558720 780 ntTSL 2 BASIC17.91■□□□□ 0.46
COL15A1P39059 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC17.91■□□□□ 0.46
COL15A1P39059 AL139339.2-201ENST00000608063 657 ntBASIC17.91■□□□□ 0.46
COL15A1P39059 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.91■□□□□ 0.46
COL15A1P39059 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.91■□□□□ 0.46
COL15A1P39059 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COL15A1P39059 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
COL15A1P39059 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC17.91■□□□□ 0.46
COL15A1P39059 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COL15A1P39059 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 AC007952.5-201ENST00000572818 1486 ntBASIC17.91■□□□□ 0.46
COL15A1P39059 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
COL15A1P39059 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC17.91■□□□□ 0.46
COL15A1P39059 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC17.91■□□□□ 0.46
COL15A1P39059 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms