Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC007326.1-201ENST00000604539 458 ntBASIC14.13□□□□□ -0.15
TRIM23P36406 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.13□□□□□ -0.15
TRIM23P36406 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.13□□□□□ -0.15
TRIM23P36406 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.13□□□□□ -0.15
TRIM23P36406 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRIM23P36406 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM23P36406 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM23P36406 SHMT1P1-201ENST00000419974 1312 ntBASIC14.13□□□□□ -0.15
TRIM23P36406 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM23P36406 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.13□□□□□ -0.15
TRIM23P36406 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM23P36406 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.13□□□□□ -0.15
TRIM23P36406 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.13□□□□□ -0.15
TRIM23P36406 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRIM23P36406 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM23P36406 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRIM23P36406 OR2I1P-210ENST00000642037 4691 ntBASIC14.12□□□□□ -0.15
TRIM23P36406 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRIM23P36406 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM23P36406 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM23P36406 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 AC103592.1-201ENST00000394513 664 ntBASIC14.12□□□□□ -0.15
TRIM23P36406 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRIM23P36406 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM23P36406 AC073869.2-201ENST00000417338 1026 ntBASIC14.12□□□□□ -0.15
TRIM23P36406 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.12□□□□□ -0.15
TRIM23P36406 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.12□□□□□ -0.15
TRIM23P36406 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
TRIM23P36406 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRIM23P36406 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.12□□□□□ -0.15
TRIM23P36406 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.12□□□□□ -0.15
TRIM23P36406 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM23P36406 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.12□□□□□ -0.15
TRIM23P36406 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRIM23P36406 AC138894.2-201ENST00000602838 371 ntBASIC14.12□□□□□ -0.15
TRIM23P36406 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.12□□□□□ -0.15
TRIM23P36406 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM23P36406 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM23P36406 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
TRIM23P36406 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
TRIM23P36406 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM23P36406 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TRIM23P36406 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.12□□□□□ -0.15
TRIM23P36406 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.12□□□□□ -0.15
TRIM23P36406 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM23P36406 RPL13AP3-202ENST00000494676 1473 ntBASIC14.12□□□□□ -0.15
TRIM23P36406 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.12□□□□□ -0.15
TRIM23P36406 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM23P36406 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM23P36406 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.12□□□□□ -0.15
TRIM23P36406 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM23P36406 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM23P36406 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM23P36406 HSPA8P5-201ENST00000456928 2069 ntBASIC14.11□□□□□ -0.15
TRIM23P36406 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM23P36406 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM23P36406 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM23P36406 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM23P36406 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM23P36406 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM23P36406 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.11□□□□□ -0.15
TRIM23P36406 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TRIM23P36406 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM23P36406 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM23P36406 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRIM23P36406 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRIM23P36406 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM23P36406 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM23P36406 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM23P36406 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM23P36406 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM23P36406 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRIM23P36406 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM23P36406 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM23P36406 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM23P36406 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms