Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.51■□□□□ 0.39
PDE6BP35913 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC17.51■□□□□ 0.39
PDE6BP35913 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PDE6BP35913 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PDE6BP35913 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17.5■□□□□ 0.39
PDE6BP35913 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PDE6BP35913 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 AC103592.1-201ENST00000394513 664 ntBASIC17.5■□□□□ 0.39
PDE6BP35913 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 RNLS-203ENST00000437752 525 ntTSL 2 BASIC17.5■□□□□ 0.39
PDE6BP35913 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC17.5■□□□□ 0.39
PDE6BP35913 AC092903.1-201ENST00000466506 262 ntBASIC17.5■□□□□ 0.39
PDE6BP35913 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC17.5■□□□□ 0.39
PDE6BP35913 BAK1P2-201ENST00000532665 631 ntBASIC17.5■□□□□ 0.39
PDE6BP35913 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC17.5■□□□□ 0.39
PDE6BP35913 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC17.5■□□□□ 0.39
PDE6BP35913 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PDE6BP35913 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC17.5■□□□□ 0.39
PDE6BP35913 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.5■□□□□ 0.39
PDE6BP35913 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 AL109954.1-202ENST00000564051 2148 ntBASIC17.5■□□□□ 0.39
PDE6BP35913 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PDE6BP35913 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6BP35913 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6BP35913 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.49■□□□□ 0.39
PDE6BP35913 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6BP35913 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6BP35913 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6BP35913 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.49■□□□□ 0.39
PDE6BP35913 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6BP35913 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6BP35913 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.49■□□□□ 0.39
PDE6BP35913 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.49■□□□□ 0.39
PDE6BP35913 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6BP35913 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6BP35913 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.49■□□□□ 0.39
PDE6BP35913 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6BP35913 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6BP35913 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC17.49■□□□□ 0.39
PDE6BP35913 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6BP35913 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC17.49■□□□□ 0.39
PDE6BP35913 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC17.49■□□□□ 0.39
PDE6BP35913 NRADDP-201ENST00000437305 691 ntBASIC17.49■□□□□ 0.39
PDE6BP35913 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC17.49■□□□□ 0.39
PDE6BP35913 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC17.49■□□□□ 0.39
PDE6BP35913 GOLGA2P8-201ENST00000505201 779 ntBASIC17.49■□□□□ 0.39
PDE6BP35913 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6BP35913 RN7SL121P-201ENST00000584223 273 ntBASIC17.49■□□□□ 0.39
PDE6BP35913 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC17.49■□□□□ 0.39
PDE6BP35913 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC17.49■□□□□ 0.39
PDE6BP35913 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC17.49■□□□□ 0.39
PDE6BP35913 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6BP35913 AC005274.1-201ENST00000623460 802 ntBASIC17.49■□□□□ 0.39
PDE6BP35913 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6BP35913 AL354702.1-201ENST00000442006 1960 ntBASIC17.49■□□□□ 0.39
PDE6BP35913 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6BP35913 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6BP35913 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.49■□□□□ 0.39
PDE6BP35913 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PDE6BP35913 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6BP35913 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
PDE6BP35913 AC117503.4-201ENST00000623229 1418 ntBASIC17.48■□□□□ 0.39
PDE6BP35913 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6BP35913 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.48■□□□□ 0.39
PDE6BP35913 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6BP35913 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.48■□□□□ 0.39
PDE6BP35913 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PDE6BP35913 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC17.48■□□□□ 0.39
PDE6BP35913 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6BP35913 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.48■□□□□ 0.39
PDE6BP35913 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
PDE6BP35913 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6BP35913 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6BP35913 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6BP35913 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6BP35913 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PDE6BP35913 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC17.48■□□□□ 0.39
PDE6BP35913 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PDE6BP35913 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC17.48■□□□□ 0.39
PDE6BP35913 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms