Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC13P31276 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC13P31276 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC13P31276 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC13P31276 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC13P31276 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HOXC13P31276 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC13P31276 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC13P31276 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HOXC13P31276 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.79□□□□□ -0.04
HOXC13P31276 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.79□□□□□ -0.04
HOXC13P31276 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC13P31276 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.79□□□□□ -0.04
HOXC13P31276 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.79□□□□□ -0.04
HOXC13P31276 SHMT1P1-201ENST00000419974 1312 ntBASIC14.79□□□□□ -0.04
HOXC13P31276 TSPY25P-201ENST00000429463 745 ntBASIC14.79□□□□□ -0.04
HOXC13P31276 AL627422.1-201ENST00000434104 580 ntBASIC14.79□□□□□ -0.04
HOXC13P31276 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.79□□□□□ -0.04
HOXC13P31276 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.79□□□□□ -0.04
HOXC13P31276 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HOXC13P31276 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HOXC13P31276 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.79□□□□□ -0.04
HOXC13P31276 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC13P31276 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.79□□□□□ -0.04
HOXC13P31276 AL512310.5-201ENST00000551999 515 ntBASIC14.79□□□□□ -0.04
HOXC13P31276 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC13P31276 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC13P31276 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.79□□□□□ -0.04
HOXC13P31276 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.79□□□□□ -0.04
HOXC13P31276 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.79□□□□□ -0.04
HOXC13P31276 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.79□□□□□ -0.04
HOXC13P31276 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC13P31276 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HOXC13P31276 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.79□□□□□ -0.04
HOXC13P31276 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC13P31276 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC13P31276 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.79□□□□□ -0.04
HOXC13P31276 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
HOXC13P31276 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC13P31276 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.79□□□□□ -0.04
HOXC13P31276 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC13P31276 AL928921.2-201ENST00000641325 2442 ntBASIC14.78□□□□□ -0.04
HOXC13P31276 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HOXC13P31276 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC13P31276 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXC13P31276 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC13P31276 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC13P31276 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC13P31276 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC13P31276 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HOXC13P31276 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC13P31276 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXC13P31276 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC13P31276 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC13P31276 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC13P31276 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC13P31276 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
HOXC13P31276 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXC13P31276 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
HOXC13P31276 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC13P31276 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC13P31276 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC13P31276 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HOXC13P31276 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HOXC13P31276 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.78□□□□□ -0.04
HOXC13P31276 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC13P31276 AL807761.2-201ENST00000422849 729 ntBASIC14.78□□□□□ -0.04
HOXC13P31276 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC13P31276 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.78□□□□□ -0.04
HOXC13P31276 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC13P31276 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXC13P31276 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC13P31276 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC13P31276 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC13P31276 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC13P31276 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.78□□□□□ -0.04
HOXC13P31276 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.78□□□□□ -0.04
HOXC13P31276 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXC13P31276 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC13P31276 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
HOXC13P31276 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC13P31276 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC13P31276 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC13P31276 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC13P31276 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXC13P31276 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HOXC13P31276 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC13P31276 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC13P31276 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC13P31276 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC13P31276 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC13P31276 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC13P31276 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
HOXC13P31276 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
HOXC13P31276 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.77□□□□□ -0.04
HOXC13P31276 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.77□□□□□ -0.04
HOXC13P31276 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC13P31276 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC13P31276 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC13P31276 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms