Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.79□□□□□ -0.36
CTLA4P16410 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.79□□□□□ -0.36
CTLA4P16410 AC100827.2-201ENST00000563214 1194 ntBASIC12.79□□□□□ -0.36
CTLA4P16410 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.79□□□□□ -0.36
CTLA4P16410 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.79□□□□□ -0.36
CTLA4P16410 AC244157.2-201ENST00000616239 1006 ntBASIC12.79□□□□□ -0.36
CTLA4P16410 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CTLA4P16410 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CTLA4P16410 AL162426.1-201ENST00000624141 743 ntBASIC12.79□□□□□ -0.36
CTLA4P16410 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.79□□□□□ -0.36
CTLA4P16410 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.79□□□□□ -0.36
CTLA4P16410 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.79□□□□□ -0.36
CTLA4P16410 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CTLA4P16410 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.79□□□□□ -0.36
CTLA4P16410 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.79□□□□□ -0.36
CTLA4P16410 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CTLA4P16410 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
CTLA4P16410 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.78□□□□□ -0.36
CTLA4P16410 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.78□□□□□ -0.36
CTLA4P16410 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.78□□□□□ -0.36
CTLA4P16410 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CTLA4P16410 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CTLA4P16410 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.78□□□□□ -0.36
CTLA4P16410 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.78□□□□□ -0.36
CTLA4P16410 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CTLA4P16410 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.78□□□□□ -0.36
CTLA4P16410 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CTLA4P16410 AC099336.1-201ENST00000417053 1171 ntBASIC12.78□□□□□ -0.36
CTLA4P16410 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.78□□□□□ -0.36
CTLA4P16410 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.78□□□□□ -0.36
CTLA4P16410 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.78□□□□□ -0.36
CTLA4P16410 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.78□□□□□ -0.36
CTLA4P16410 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.78□□□□□ -0.36
CTLA4P16410 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CTLA4P16410 AC124068.2-201ENST00000569473 1109 ntBASIC12.78□□□□□ -0.36
CTLA4P16410 AC005962.1-201ENST00000584100 773 ntBASIC12.78□□□□□ -0.36
CTLA4P16410 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.78□□□□□ -0.36
CTLA4P16410 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.78□□□□□ -0.36
CTLA4P16410 AC009884.2-201ENST00000603110 324 ntBASIC12.78□□□□□ -0.36
CTLA4P16410 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 MIR6775-201ENST00000617557 69 ntBASIC12.78□□□□□ -0.36
CTLA4P16410 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.78□□□□□ -0.36
CTLA4P16410 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.78□□□□□ -0.36
CTLA4P16410 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.78□□□□□ -0.36
CTLA4P16410 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.78□□□□□ -0.36
CTLA4P16410 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
CTLA4P16410 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.78□□□□□ -0.36
CTLA4P16410 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 CICP17-201ENST00000418553 2377 ntBASIC12.78□□□□□ -0.36
CTLA4P16410 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CTLA4P16410 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CTLA4P16410 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTLA4P16410 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.77□□□□□ -0.36
CTLA4P16410 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CTLA4P16410 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.77□□□□□ -0.36
CTLA4P16410 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CTLA4P16410 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.36
CTLA4P16410 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CTLA4P16410 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CTLA4P16410 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CTLA4P16410 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms