Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CAPN1P07384 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.27□□□□□ -0.12
CAPN1P07384 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CAPN1P07384 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CAPN1P07384 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CAPN1P07384 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CAPN1P07384 KRT8P24-201ENST00000560290 1559 ntBASIC14.27□□□□□ -0.12
CAPN1P07384 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.27□□□□□ -0.12
CAPN1P07384 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CAPN1P07384 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CAPN1P07384 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CAPN1P07384 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CAPN1P07384 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CAPN1P07384 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CAPN1P07384 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CAPN1P07384 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN1P07384 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN1P07384 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN1P07384 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN1P07384 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.27□□□□□ -0.13
CAPN1P07384 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.27□□□□□ -0.13
CAPN1P07384 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN1P07384 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
CAPN1P07384 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.27□□□□□ -0.13
CAPN1P07384 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.27□□□□□ -0.13
CAPN1P07384 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.27□□□□□ -0.13
CAPN1P07384 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.27□□□□□ -0.13
CAPN1P07384 AL022328.3-201ENST00000607943 679 ntBASIC14.27□□□□□ -0.13
CAPN1P07384 BX088702.1-201ENST00000610784 235 ntBASIC14.27□□□□□ -0.13
CAPN1P07384 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.27□□□□□ -0.13
CAPN1P07384 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN1P07384 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.27□□□□□ -0.13
CAPN1P07384 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.27□□□□□ -0.13
CAPN1P07384 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN1P07384 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CAPN1P07384 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.27□□□□□ -0.13
CAPN1P07384 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN1P07384 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.27□□□□□ -0.13
CAPN1P07384 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN1P07384 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN1P07384 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPN1P07384 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CAPN1P07384 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.27□□□□□ -0.13
CAPN1P07384 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.26□□□□□ -0.13
CAPN1P07384 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPN1P07384 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.26□□□□□ -0.13
CAPN1P07384 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CAPN1P07384 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPN1P07384 AC009093.2-202ENST00000620513 2079 ntBASIC14.26□□□□□ -0.13
CAPN1P07384 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CAPN1P07384 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.26□□□□□ -0.13
CAPN1P07384 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPN1P07384 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.26□□□□□ -0.13
CAPN1P07384 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.26□□□□□ -0.13
CAPN1P07384 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.26□□□□□ -0.13
CAPN1P07384 COX5BP1-201ENST00000507622 393 ntBASIC14.26□□□□□ -0.13
CAPN1P07384 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.26□□□□□ -0.13
CAPN1P07384 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.26□□□□□ -0.13
CAPN1P07384 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPN1P07384 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.26□□□□□ -0.13
CAPN1P07384 AC104982.3-201ENST00000581995 514 ntBASIC14.26□□□□□ -0.13
CAPN1P07384 RN7SL713P-201ENST00000582127 302 ntBASIC14.26□□□□□ -0.13
CAPN1P07384 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 AC073413.1-201ENST00000603927 732 ntBASIC14.26□□□□□ -0.13
CAPN1P07384 AL139099.5-201ENST00000635274 300 ntBASIC14.26□□□□□ -0.13
CAPN1P07384 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CAPN1P07384 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPN1P07384 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CAPN1P07384 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CAPN1P07384 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.26□□□□□ -0.13
CAPN1P07384 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPN1P07384 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPN1P07384 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CAPN1P07384 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms